| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1786 |
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| Symbol | |
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| ID | 5322644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1868368 |
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| End bp | 1870419 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790724 |
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| Product | ferredoxin |
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| Protein accession | YP_001327456 |
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| Protein GI | 150396989 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3894] Uncharacterized metal-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00262051 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGAACG TGCCTTCGAA GGACGAAAAG AACGAACCGC TGGTGCTCTT CATGCCATCG
GGCAAACGCG GCCGCTTCCC GGTTGGCACG CCGATCCTCG ATGCCGCTCG CTCGCTCGGG
GTCTATGTCG AAAGCGTCTG CGGCGGTCGC GCCACCTGCG GGCGGTGCCA GGTGTCCGTC
CAGGAAGGCA ATTTCGCCAA GCACAAAATC GTCTCTTCCA ACGACCATAT CTCGCCATTC
GGGCCCAAGG AGCAGCGTTA CGCCAGCGTA CGTCAATTGC CCGACGGCCG CCGCCTATCG
TGCTCGGCCC AGATCCTCGG CGATCTCGTC ATAGACGTGC CGCAGGACAC AGTCATCAAC
GCTCAGGTGG TGCGCAAGGC CGCGACCGAC CGCGTTATCG AGCGCAATGC TGCAGTACAA
CTGTGTTATG TCGAAATCGA CGAGCCGGAT ATGCACAAGC CGCTCGGCGA TTTCGATCGG
ATGAAGGCCG TATTGGAGAA AGACTGGGGC TGGAAGGATC TCCTGATCGC TCCACACCTC
ATCCCACAGG TGCAAGGCAT ATTGCGCAAG GGAAATTGGA CGGTGACCGC AGCAATCCAC
CGCGACATGG ATTCCTCCCG TCCCTTTATC GTCGGGCTAT GGCCGGGGCT GAAGAACGAG
GCATATGGCG TCGCCTGCGA CATCGGCTCG ACGACGATTG CGATGCATCT CGTATCGCTG
CTGTCCGGAC GTATAGCCGC CTCCTCGGGA ACCTCGAATC CGCAGATCCG CTTTGGTGAG
GATCTGATGA GCCGCGTTTC TTACGTGATG ATGAACCCGG ATGGCCGGGA GGCAATGACC
AAGGCCGTGC GCGACGCCGT GAACGACCTC ATCGGCAAGG TTTGCGCCGA AGGCGAGGTC
GATCGCCACG ACATCCTCGA TCTGGTCTTC GTCGGCAATC CGATCATGCA TCATCTGTTT
CTCGGGATTG ATCCGACAGA ACTCGGACAG GCACCATTTG CCCTCGCCGT CTCCGGTGCC
CTACAATATT GGGCGCATGA GATCGACATC GAGGTCAACC GCGGCGCGCG CATCTATATG
CTTCCCTGTA TCGCCGGCCA TGTCGGAGCG GATGCCGCAG GTGCGACACT TTCCGAAGGG
CCGCACCGCC AGGACAACAT GATGCTGCTG GTCGACGTAG GGACCAATGC CGAAATCGTA
CTCGGCAACA AGGAGCGCGT CGTCGCGGCC TCCTCGCCGA CCGGCCCGGC GTTTGAAGGG
GCCGAGATTT CTTCCGGACA ACGTGCAGCA CCAGGGGCGA TCGAGCGCGT GCGCATCGAT
CCCGAGACTT TGGAGCCGCG GTTCCGGGTG ATCGGTGTCG ATAAATGGTC GGACGAAGAA
GGTTTCGCCG AAGCCGCCGC GGCAGTCGGT GTAACTGGAA TCTGCGGCTC GGCGATTATC
GAGGTCGTGG CGGAGATGTA CCTCACGGGC ATCATTTCGC AGGACGGCGT CGTCGACGGC
GCAATGGCGG CGAAAAGCCC CCGCATCATC CCGAACGGCC GCACCTTTTC CTACCTACTG
CACGATGGCG CACAACGAAT CACCGTGACG CAGAACGACA TCAGGGCGAT CCAGCTCGCC
AAGTCGGCGC TCTATGCCGG AATTAAGCTG CTCATGGAGA AACAGGGCGT CGATCACGTC
GACACGATCC GGTTTGCCGG CGCCTTCGGC TCCTTCATCG ATCCAAAATA TGCCATGGTG
CTGGGCCTGA TACCCGATTG CGACCTCACG GAAGTGAAGG CGGTTGGCAA TGCCGCCGGC
ACCGGCGCGC TGATGGCGCT CCTCAATCGC GGACACCGTC GCGAAATCGA GCAAACCGTG
AGGAAAATCG AGAAGATAGA GACGGCGCTT GAATCAAAAT TTCAGGAGCA TTTCGTCAAC
GCAATGGCGA TGCCGAACAA GGTGGATGCC TTCCCGAAAC TCGCCGAAGT GGTTACCTTG
CCGGCACGCA AGGTGCTGAC CGATGACGGT GGCGACGGAA GTGGACGCAG ACGGCGACGC
AACAGGGAAT AG
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| Protein sequence | MLNVPSKDEK NEPLVLFMPS GKRGRFPVGT PILDAARSLG VYVESVCGGR ATCGRCQVSV
QEGNFAKHKI VSSNDHISPF GPKEQRYASV RQLPDGRRLS CSAQILGDLV IDVPQDTVIN
AQVVRKAATD RVIERNAAVQ LCYVEIDEPD MHKPLGDFDR MKAVLEKDWG WKDLLIAPHL
IPQVQGILRK GNWTVTAAIH RDMDSSRPFI VGLWPGLKNE AYGVACDIGS TTIAMHLVSL
LSGRIAASSG TSNPQIRFGE DLMSRVSYVM MNPDGREAMT KAVRDAVNDL IGKVCAEGEV
DRHDILDLVF VGNPIMHHLF LGIDPTELGQ APFALAVSGA LQYWAHEIDI EVNRGARIYM
LPCIAGHVGA DAAGATLSEG PHRQDNMMLL VDVGTNAEIV LGNKERVVAA SSPTGPAFEG
AEISSGQRAA PGAIERVRID PETLEPRFRV IGVDKWSDEE GFAEAAAAVG VTGICGSAII
EVVAEMYLTG IISQDGVVDG AMAAKSPRII PNGRTFSYLL HDGAQRITVT QNDIRAIQLA
KSALYAGIKL LMEKQGVDHV DTIRFAGAFG SFIDPKYAMV LGLIPDCDLT EVKAVGNAAG
TGALMALLNR GHRREIEQTV RKIEKIETAL ESKFQEHFVN AMAMPNKVDA FPKLAEVVTL
PARKVLTDDG GDGSGRRRRR NRE
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