| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1718 |
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| Symbol | |
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| ID | 5322576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1797917 |
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| End bp | 1798702 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640790656 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001327388 |
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| Protein GI | 150396921 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.367092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGC TTCCTCTATC CAAGGCAGTA TTCGGCTCTG CCGTCGTCGT CTTTCTGATG
GCACCACTGT TTGCGATCCT GCCATTGGCG TTCACGGATA GCGTCTTCCT CAACTACCCG
ATCCCGAGCT TCTCGCTGAG GTGGTTCGAT GAACTGTTCA CGGCCGATGC CTGGAGGCGC
TCGATCATCA ACAGCCTGAT CATCGGAGCA GGAACGACCG TGCTTGCAAC CGTGTTGGGG
ACGGTTGCAT CGCTTGGACT TCGCGGCAGG TCCGTATCGC TGCTGTTCGG CTTCTTCCGC
ACGGTGTTCC TGCTGCCGAT GGTGGTTCCA GCGGTGGTTC TGGGCGTCGG CATGCAGTTG
ATGTTTGCAC AGTACGGGCT CGCGAACACC TATCTGGGGG TGATCGTGGC GCATACGGTC
ATTGCCATTC CGTTTGTGGT GGTCAACGTC ACGGCCGCGT TGCAAGGCAT CGATCACCGG
CTCGAAAACG CTGCCGCGAG CCTTGGGGCA CCGCCGATCG TGGTCCTCAG GAGAGTCACG
CTGCCCCTGG CAATGCCGGG CATCATTTCA GGAGCAGTCT TTGCGTTTGC GACCTCGCTT
GATGAGGTGG TGCTGACGTT GTTTGTCGCG GGTCCCAACC AGAGAACCGT CGCACGGCAG
ATGTTCTCCA CGATCCGCGA AAACATCAGC CCCGCCATCG CTGCAGCCGC ATTCCTGTTC
ATCGCAGGAA CCGTTGTGAT CGCGGCCCTG GTTTATCTCG TCCGACGGAG AAACCAGATC
GCTTAG
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| Protein sequence | MKALPLSKAV FGSAVVVFLM APLFAILPLA FTDSVFLNYP IPSFSLRWFD ELFTADAWRR
SIINSLIIGA GTTVLATVLG TVASLGLRGR SVSLLFGFFR TVFLLPMVVP AVVLGVGMQL
MFAQYGLANT YLGVIVAHTV IAIPFVVVNV TAALQGIDHR LENAAASLGA PPIVVLRRVT
LPLAMPGIIS GAVFAFATSL DEVVLTLFVA GPNQRTVARQ MFSTIRENIS PAIAAAAFLF
IAGTVVIAAL VYLVRRRNQI A
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