Gene Smed_1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1476 
Symbol 
ID5322334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1562364 
End bp1563191 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content64% 
IMG OID640790424 
Producthypothetical protein 
Protein accessionYP_001327156 
Protein GI150396689 
COG category[S] Function unknown 
COG ID[COG2833] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.444109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0249969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACC TTCCGCAATT CCACAGCCTG CGCGGCGCGG CTGTCGAAGC GATCCGCGCC 
GCCGACCTTA GCGTCAAGAC CGAGCTCGCT CAGGAAGCGT CGCGGCGCTG GCAGGCGCGA
AAGCTGTCCT TGCGCTCTCC CCTGGACCGC GCCGTGCCCG AGCGGCCGGG CCGCCCGGAA
AAGCCCGTTC TGACACCCCC GACTCAGGTC AAGCGGCGCT CGCTCGGTTC GCTGAAGGGA
CGTGTCGCCT TGCTTCACGC CATTGCTCAT ATTGAACTGA ACGCCGTAGA TCTGGCTCTC
GACATCGTCG CACGCTTTGC GTCCGAACCG GTGCCGAATT CCTTCTTTGA CGGCTGGATG
CAGGTCGCCT TCGAGGAAGC CAAACATTTT CGAATGGTTC GGCAAAGACT GAACGATCTG
GGGGCCGACT ATGGCGACCT TCCCGCACAT GACGGCCTTT GGCAGGCGGC GCATGACACG
CGCAACGACC TGACCGCCCG CCTCGCCGTC GTGCCGCTCA TTCTAGAGGC CCGCGGTCTC
GATGTGACAC CCGCATTGCG CGCGAAAATG CGAGAGACCG GCGACAACGA GAGCGCCGCT
GTGCTCGACG TGATCTATGA GGACGAGAAG GGCCATGTCG CAATCGGAGC GAAATGGTTC
CGCTTTCTTT GCGCCCGGCA AAGGAAGGAC CCGGCCGTCG CCTTTCAAAC CCTCGTGCGG
GCAAACTTCC GCGGCCCGCT GAAGCCCCCC TTCAACGACA TTGCCCGCGC CGAGGCGGGG
TTGACCCCCT CGTTTTATCG GTCAATGACT GCCGCCACCA ACATCTGA
 
Protein sequence
MANLPQFHSL RGAAVEAIRA ADLSVKTELA QEASRRWQAR KLSLRSPLDR AVPERPGRPE 
KPVLTPPTQV KRRSLGSLKG RVALLHAIAH IELNAVDLAL DIVARFASEP VPNSFFDGWM
QVAFEEAKHF RMVRQRLNDL GADYGDLPAH DGLWQAAHDT RNDLTARLAV VPLILEARGL
DVTPALRAKM RETGDNESAA VLDVIYEDEK GHVAIGAKWF RFLCARQRKD PAVAFQTLVR
ANFRGPLKPP FNDIARAEAG LTPSFYRSMT AATNI