| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1459 |
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| Symbol | radC |
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| ID | 5322317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1541230 |
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| End bp | 1542012 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790407 |
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| Product | DNA repair protein RadC |
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| Protein accession | YP_001327139 |
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| Protein GI | 150396672 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2003] DNA repair proteins |
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| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.734795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00198862 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGACGAAGA CACCGCCCGC CCCCGAACCC GACGTCCTTT TCGGCGCCAC GGACGAACGT
CAGTTTATCC CGCAGCAGCA AACGCCCGCC GCCGCGCCGG CGCCCGCAGA GGATGCTCAC
TATCACGGCC ATCGGGATCG CCTGCGGGCT CGCTACCGTG AATACGGCGA CGCGGCGCTG
GCGGATTACG AAATTCTCGA ACTCATTCTC TTCCGCCTCA TCCCCCGCCG CGATACGAAG
CCGATCGCCA AGGCCCTGCT CGCCCGGTTC GGCACGCTCG CCGGCGTCTT CGGTGCCCCT
TTGCACCTGC TTCACGAAGT GAAGGGAGTT AAGGAATCCG TTGCGCTCGA TCTAAAGCTC
GTCGCCACCG CCAGTCATCG CATGCTCAAG AGCGAATTGC GTAATAAGCA GGTTCTCTCC
TCCTGGAGCG CCGTGATCGA TTATTGCCAT GCAGCGATGG CGCATGAGAC GAAGGAGCAG
TTCCGCATCC TTTTTCTGGA CAAACGCAAC ACGCTGATCG CCGACGAGGT GCAGCAGCAG
GGAACAATCG ACCACACGCC CGTCTATCCT CGCGAGGTGG TCAAACGCGC ACTGGAGCTT
TCCGCCACTG CGTTGATCCT CGTCCACAAC CATCCCTCCG GCGACCCGAC GCCGTCTTGC
GCCGATATCG AGATGACGAA GCTCATCGCC GAGGCCGCCA AGCCGCTCGG CATTGCGCTT
CACGATCACG TCATCATCGG CAAGGACGGC CACGTCAGTC TCAAGGGGCT TCAATTGTTC
TGA
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| Protein sequence | MTKTPPAPEP DVLFGATDER QFIPQQQTPA AAPAPAEDAH YHGHRDRLRA RYREYGDAAL
ADYEILELIL FRLIPRRDTK PIAKALLARF GTLAGVFGAP LHLLHEVKGV KESVALDLKL
VATASHRMLK SELRNKQVLS SWSAVIDYCH AAMAHETKEQ FRILFLDKRN TLIADEVQQQ
GTIDHTPVYP REVVKRALEL SATALILVHN HPSGDPTPSC ADIEMTKLIA EAAKPLGIAL
HDHVIIGKDG HVSLKGLQLF
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