| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1408 |
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| Symbol | trpD |
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| ID | 5322259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1489869 |
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| End bp | 1490882 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640790350 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_001327089 |
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| Protein GI | 150396622 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.457707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATT TGAAACCGTT CGTCGCCAAA GTCGCAGCGC GCGAGGCACT TAGCCGCGAC
GATGCACGCG CGGCCTTCGA GATCATCATG TCCGGGGCGG CCACGCCGTC GCAGATCGGC
GGCTTTCTCA TGGCGCTCCG TGTACGCGGC GAAACGGTCG ACGAGATCGT GGGTGCCGTC
GGGGCGATGC GTGCACGCAT GTTGCACGTG AAGGCGCCGG ACGGTTCGAT CGACATTGTC
GGCACCGGCG GCGACGGCGC CGGCACCTAC AATATTTCGA CGTTGGCCGC GCTGATCGTT
GCAGGCGCGG GGGTGCCGGT CGCCAAGCAC GGCAACCGTG CGCTGAGCTC GAAATCAGGA
ACGGCCGATG CGCTCTCCTG CCTGGGCGTC AATCTCGAAA TAGGGCCCGA GGCAATCTCG
CGCTGCATCG GCGAAGCCGG TCTGGGCTTC ATGTTCGCGC AGCAGCACCA TTCGGCTATG
CGCCATGTCG GTCCGACGCG GGTGGAACTC GGAACGAGAA CGATCTTCAA CCTGCTCGGC
CCCCTCGCCA ATCCGGCCGG CGTTCGGCAA CAGCTCGTCG GCGTCTACGC GCCGCAATGG
GTCGATCCGC TGGCAGAGGT GCTCCGCGAT CTCGGCTCCG AGAGTGTCTG GGTCGTCCAT
GGCGAAGGGC TCGACGAGAT CACGACGACC GGAGTGACCA AGGTTGCGGC GCTCAAGGAC
GGCACGATCA CCAACTTCGA ACTGACACCG GCCGATTTCG GGCTCGAGCG CGTTACGCTC
GATGCCTTGA AGGGCGGTGA CGGCGCCCAT AACGCCGCCG CGCTGCAAGC TGTTCTCGAC
GGTGCGGAGA ATGCCTACCG GGACATTTCC CTTGCGAACG CCGCCGCTTC GTTGATGATA
GCGGGGCGCG CAAAGGACCT GATGGAGGGC ATGGACTTGG CCCGGAAATC GCTTTCGAGC
GGCGCCGCAA AGGTCGCCTT GCAGCGATTG ATCACCGTTT CGAACGCGGC ATGA
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| Protein sequence | MSDLKPFVAK VAAREALSRD DARAAFEIIM SGAATPSQIG GFLMALRVRG ETVDEIVGAV
GAMRARMLHV KAPDGSIDIV GTGGDGAGTY NISTLAALIV AGAGVPVAKH GNRALSSKSG
TADALSCLGV NLEIGPEAIS RCIGEAGLGF MFAQQHHSAM RHVGPTRVEL GTRTIFNLLG
PLANPAGVRQ QLVGVYAPQW VDPLAEVLRD LGSESVWVVH GEGLDEITTT GVTKVAALKD
GTITNFELTP ADFGLERVTL DALKGGDGAH NAAALQAVLD GAENAYRDIS LANAAASLMI
AGRAKDLMEG MDLARKSLSS GAAKVALQRL ITVSNAA
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