Gene Smed_1354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1354 
Symbol 
ID5322204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1436794 
End bp1437873 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content63% 
IMG OID640790296 
Producthypothetical protein 
Protein accessionYP_001327037 
Protein GI150396570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCATC TGATCGGTGG CATCGTCCCT TGGCTCGGGC TCGATAACCA AATCTTCGGT 
ACGAACGATC CGGACGTAAT CTTCGGAGAC CCGTTCACAA CCGGCAATAC ACTCGATGTC
CTCGAGATCG GCGGATCCCT GTCTTCGGGG CAGGGCGGCC GCGACCGCCT CGACGGCCGC
GCAGGCAGCG ACACCATTTT CGGGGACGCG TGGGCGATCG CCGATGAGGG GCGCGGCGGC
GACGACGAGC TCTATGGCGG CATAGGTAAC GACACGCTCT ACGGTGATGC CTTTTCGATC
GATGTGAGTG ACTCCCTAGC CGTAGCGGGA GGGAATGACC GCCTCGACGG AGGCAAGGGC
AACGACACGC TCTACGGCGA CGGATACAAT TGCCTTAGCG GGCGCGGTGG CGACGACATG
CTCGACGGCG GCGCCGGAGA CGACGTACTC TCTGGTGACG CCTTCTCGTT GGGCGACTTC
TTCACCGGCG GAAACGATAG GCTCCAAGGC GGGGAGGGCA GCGACCACCT TTACGGCGAT
GGCCTGGATC AGGGTGTCGT GGAGTCCGGG ATTGGCGGCA ACGACCAGCT CTATGGCGGC
GCCGGCAACG ACTTCATCGT CGGCGATGTC CTTTTCTCAC GCGGCGGCAG TGGCGGCGAC
GACCTTCTCG ACGGCGGCAG GGGCGACGAC ATACTTTACG GCGATGCGGA AGTCGGCGTC
GACACAGCGG GGGGAGACGA CCTCTTGGTC GGCGGCGTCG GCAACGATCA GCTCTGGGGC
GACGGCCGAC TTACCGCAGC CTTCGCGGTG GAGACGGGTG CCGACCAGTT CCTTTTTGCA
CGGCACAGTG GCCGCGATGA GATCTTTGAT TTCGAACTCG GCAAGGACGT CATCCATATC
GCCGGCTATG GCTACGCTGA TCTTGCCGAC TTGCTGCCCA ACATCAGTGA CGATGCCAGC
GGTAACGCTG TTCTGAACCT GAATGGCACG GTAGACCAGG TCACGCTGAT CGGCGTCCAA
ACCGCCGATC TCAGCGCGCA CAACTTCGTC TTCGCGAATG CGGATCTGGC GTTCGTCTGA
 
Protein sequence
MAHLIGGIVP WLGLDNQIFG TNDPDVIFGD PFTTGNTLDV LEIGGSLSSG QGGRDRLDGR 
AGSDTIFGDA WAIADEGRGG DDELYGGIGN DTLYGDAFSI DVSDSLAVAG GNDRLDGGKG
NDTLYGDGYN CLSGRGGDDM LDGGAGDDVL SGDAFSLGDF FTGGNDRLQG GEGSDHLYGD
GLDQGVVESG IGGNDQLYGG AGNDFIVGDV LFSRGGSGGD DLLDGGRGDD ILYGDAEVGV
DTAGGDDLLV GGVGNDQLWG DGRLTAAFAV ETGADQFLFA RHSGRDEIFD FELGKDVIHI
AGYGYADLAD LLPNISDDAS GNAVLNLNGT VDQVTLIGVQ TADLSAHNFV FANADLAFV