| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1276 |
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| Symbol | |
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| ID | 5322123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1369417 |
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| End bp | 1370916 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790217 |
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| Product | transcriptional regulator domain-containing protein |
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| Protein accession | YP_001326961 |
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| Protein GI | 150396494 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5616] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.110816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTTG CCTTCGGTCC CTTCGTGCTT GATCCGGGTG CTGGAACGCT CCTTCGGAAC
GACGATCATA TTGCCGTCGG CTACCGCGGA GTGAAGCTGC TTGCAGCGCT CGTCGGACAG
CCCGGAGAAA TCCTGAGCAA GGCCGAGCTG ATCGAGGCGG CATGGCCGGG CAGGGTTGTC
GAGGAAGGCA ACCTCACTGT CCAGATTGCC CTGCTGCGGA AGCTGCTTGG CCCTGCCGCC
GACCGCGGTG AATGGATCGT CACGGTTCCG CGCGTCGGCT ATCGCTTCGC GAAGTCCGTC
GAACAGCTCG GCGGGGCGAA GCGAGAAGCC CTGCCGCTGC CCGAGAAACC GTCGATAGCC
GTGCTGCCCT TCGTCAATTT GAGCAAGGAC CCTGATCAGG AGTCCTTCGC GGATGGTTTG
ACCGCGGACC TCATTACCGA CTTGTCCAGG ACTCCGGGCC TGTTCGTCAT CGCACGCAAC
TCGGTCTTCG CCTACAAGGC AAAGACGATG GAAGTTCGCG AAATCGCACG GGATTTGGGC
GTCCGTTACC TGCTGCAAGG CAGCGCAAGG CGCGCCGCGG GCCGCGCACG CATCAACGCC
CAGCTGGTCG ACGCGATGAG TGGGGAGCAT CTATGGGCCG AGCGCTACGA CCGCAGCCTG
GATGATATCT TTTCTGTACA GGACGAGGTC ACCGGCAAGA TCGTGAAAGC ACTGCTTGGC
CGGCTGCGCG CGCCAACGCC GCGCAACCGG CCAAAAAATG TCGAGGCTTA CGATCTTTGC
GTCAGAGCAC GCAAGCTGAT GGATGATTCG CCTCAGACGG CGCGGGAGGC GCATCTGATG
CTGACGCGCG CGGTTTCGCT CGATCCGGAA TATGCCGAGG CCTATCGCTG GCTTGCCATA
AACCACTGGA TGGGATTGGT ACATTCCGGC GGACCGACCG TGTCTTCGCG TGGCATCGCT
TTGGAACTGG CGCGCAAGGC CGTTGCAATC GACCCCGGCG ATGCCGGCTG TCGCTGGGTC
CTGGCTTACC TTCTTGCCTA TGACCAAAGG TTTACCGAAG CGGACGCGGA ATTCGCCAAA
GCGGTCGAAC TCGACCCGAA CGAGGCGGAC GCCTGGGCGG CTCTATCCGA CATCACCGTT
CTGGCGGGTC AGGTCGAGGA AGGCCTCGAT CACATCCGCA GGGCGTTCCG GCTGAACCCT
TTTCCGGCGA GTTGGTACTA TCTGACGCTC GGTCAGGCAC AATACGCGGC CGGCGAATAC
GAGGCCGCTG TCGAGACGCT GCGCAGGGAC GAGACTTATC GTACAAGTTC ACGCCGTTTC
CTGGCGGCAA GCCTTGCTCA ACTCGGCCGG CTCGACGAAG CGCGGGCCGA GGTCGAGCTA
TTCCTCGTCG GCAATCCGCA TTTCACAATC CGCCACTGGG CTGCGACGGA GCCATTCCGC
GATGCGGCAA CACTCGAGCA TTTCGTCCTC GGCTATCGCG GGGCCGGTTT GCCAGAGTGA
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| Protein sequence | MRFAFGPFVL DPGAGTLLRN DDHIAVGYRG VKLLAALVGQ PGEILSKAEL IEAAWPGRVV
EEGNLTVQIA LLRKLLGPAA DRGEWIVTVP RVGYRFAKSV EQLGGAKREA LPLPEKPSIA
VLPFVNLSKD PDQESFADGL TADLITDLSR TPGLFVIARN SVFAYKAKTM EVREIARDLG
VRYLLQGSAR RAAGRARINA QLVDAMSGEH LWAERYDRSL DDIFSVQDEV TGKIVKALLG
RLRAPTPRNR PKNVEAYDLC VRARKLMDDS PQTAREAHLM LTRAVSLDPE YAEAYRWLAI
NHWMGLVHSG GPTVSSRGIA LELARKAVAI DPGDAGCRWV LAYLLAYDQR FTEADAEFAK
AVELDPNEAD AWAALSDITV LAGQVEEGLD HIRRAFRLNP FPASWYYLTL GQAQYAAGEY
EAAVETLRRD ETYRTSSRRF LAASLAQLGR LDEARAEVEL FLVGNPHFTI RHWAATEPFR
DAATLEHFVL GYRGAGLPE
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