Gene Smed_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1216 
Symbol 
ID5322063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1300036 
End bp1300911 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content59% 
IMG OID640790157 
Productmetallophosphoesterase 
Protein accessionYP_001326901 
Protein GI150396434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.498854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAGG AATCCAAGCA CACTTTCGCT ATCGGCGACG TGCACGGCTG CGCAGATCTC 
CTGGCCGAGT TGCTGAATAG CATCAGGATC AAGGCTCTTG AGGCGTGCCT CGATTACCGT
GTGGTTTTCC TTGGCGATAT CATCGACAGA GGGCCTGACA GCCGCGGCGC CATGGATCTT
GTCGTCGCAA CGCTGCGCGA CGTGACCGAA TCGAAACTGA TCCTGGGCAA CCACGAGTCC
TTGCTTCTTC GCGCGATCGA CAGCGACGGC TCTGACATCT ACAACTGGAC ATCCGAAGGC
GGAGACGTTG CGCTAAGATC CTATGGCTAC CCTGCGGGTG AGCGGATCAC CGTTGATGGT
ATCCGCAGCG CAATCGGCGA GCAGCATCTC GCCTGCATGC GAGCGGCTGA ACGTTACGTA
GAGCTTGAAC ACCACATCCT GGTCCACGCA GGGATACGCG CGGGAATTCC GATGCAACGA
CAGACCCCCC ATGATCTAAT GTGGATCCGC GAAGGTTTCA TCGACTGCGT TCAATCCTTT
GGCAAGGTCA TCGTGCACGG GCACACGCCG AATGTAGGTA GAGAGGTCGA GGTCTGGCCG
AACAGGATCG CGGTCGATAC CTACGCCTAC GAATCCAACG TTCTTTCAGC CGTTCAGATC
TCGCCAACTG GAGGGGTCAG TGTGATACAG GCAGAAGCGA CTGGTGGGAT CCTGTACCTC
ACGACGGAGG AAATCCCACG GCAGATGAAC TGGGAGGCCG TCTGCAATGC GGCAGGTTTC
CAACTTGAGG TCGTGGGTGG ATTGGTGGTA CCCACACCTC GCGAGCCAGC ATCGGTCGCC
GAGCCATCTG GGCCGGCGGT CCAGATGGCG GTCTAG
 
Protein sequence
MPKESKHTFA IGDVHGCADL LAELLNSIRI KALEACLDYR VVFLGDIIDR GPDSRGAMDL 
VVATLRDVTE SKLILGNHES LLLRAIDSDG SDIYNWTSEG GDVALRSYGY PAGERITVDG
IRSAIGEQHL ACMRAAERYV ELEHHILVHA GIRAGIPMQR QTPHDLMWIR EGFIDCVQSF
GKVIVHGHTP NVGREVEVWP NRIAVDTYAY ESNVLSAVQI SPTGGVSVIQ AEATGGILYL
TTEEIPRQMN WEAVCNAAGF QLEVVGGLVV PTPREPASVA EPSGPAVQMA V