Gene Smed_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1210 
Symbol 
ID5322057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1293387 
End bp1293890 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content58% 
IMG OID640790151 
Productketosteroid isomerase-like protein 
Protein accessionYP_001326895 
Protein GI150396428 
COG category[R] General function prediction only 
COG ID[COG3631] Ketosteroid isomerase-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.187179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.389634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA GCAAACTATC GGTGGCAACC CTGCCAAGGA TTGCTTTCGC GGCCTGTGTT 
TGGGTGTTCA CGGCGGTCAG TGGCGTGGCC GCTGCAGATG AGGCCTCCAA CAAGGCGACA
GTACTGAAGG CCTTCGACGC GTGGGCTGCG GGCACCGGTA GCCCCTATGA TCTTCTTGCT
GACAACGTGA CATGGACGAT CACGGGGAAT TCGGCTGCGT CCAAGTCCTA TGGCAGCCGT
GATGCCTTCA TCAACGAGGT GATCAAGCCG TTCAATGCGC GCATGAGTGT TGGTCTCAAG
CCGACGATCC GCAACATGTA TGCAGACGGC GATACCGTCA TCGTCTTCTT CGATGCCGCT
GGAACAGCGA AGGACGGCCA GCCATACAAG AACACGTACG CGTGGTTCCT GGACCTTGAT
GGCGGCAGGA TCGTGAAGGC TTCGGCATTC TTCGACAGCA TCGCATTCAA CAAGCTCTGG
GAGCTTCCGG CGGCTGGTGA GTAA
 
Protein sequence
MSNSKLSVAT LPRIAFAACV WVFTAVSGVA AADEASNKAT VLKAFDAWAA GTGSPYDLLA 
DNVTWTITGN SAASKSYGSR DAFINEVIKP FNARMSVGLK PTIRNMYADG DTVIVFFDAA
GTAKDGQPYK NTYAWFLDLD GGRIVKASAF FDSIAFNKLW ELPAAGE