Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1070 |
Symbol | |
ID | 5321916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1138390 |
End bp | 1139280 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640790013 |
Product | hypothetical protein |
Protein accession | YP_001326758 |
Protein GI | 150396291 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.12114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.566405 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAA CCAAGCGAAC CGCCCGCCCG CTCGATCATC TCGTGCTGCC GGTGGGCGAT CTCGCGCGGA CAAGGCAGCG TCTTGCGGAT CTCGGCTTCA TCGTTGCCGA TGAAGCGCGC CATCCCTTCG GCACGGCAAA TGCCTGCGTC TTCTTCTCGG ACGGTACCTA TCTGGAGCCG CTCGCCGTCG CTTTGCGGGA GGAATGCGAG GCAGCGGCGC TCGACGGCAA CACTTTCGTC GCACGTGACC AGGCGTTCCG GTTCCGGCGC GGGCAGGAGG GTCTGTCCGC CGTGGTGCTC GGGACTCCGG ACGCGGCCGA AGATCACATC CGTTTCCGCG CTCGCGGTAT CTCCGGCGGT GAAATGCTTG AATTCTCCCG GCCAATGCGC CTGCCGGACG GGCGCGAAGC GCTCGGTTCC TTCAGGCTTG CTTTTGCAGC GGACCTGCGC TCCCCGGATC TTTTTCTTTT TACTTGCCAG CGCCTGCGTG CTCTGCCGGT CGACAGCAGC GCGCTTCACC ACCACGAGAA CGGCGTGCTG GGCATCGCCG AGGTCGTTCT TTCGGAACAG AACCCGACGG ATTTCCAGTA TCTGCTGCAG GAAGCGGTGG ACGAGCGCGA GGTGTCGGCC CATTCATTCG GCATGGACAT TCAGGCAGGC AGCGCCAAGA TTACAGTATT GACGCCGGCA GGTGTCGAGG CATTCTTCGG TCACGCGGTC GAGGGTGCGG AACGGGGCTT GCGCGGGCGT GCCGTGGTTT TCCGTGTGGG CGATCTGGAA GCCACACGCG CGCTTTTCGC GCAGAATGAT ATCGAATTCG CAGAGATGGG CGGACGCCTC ATCGTTCCGG AAGCGCCGGG GCAGGGTGTA ACTTTCGCCT TTGGAGTATG A
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Protein sequence | MSQTKRTARP LDHLVLPVGD LARTRQRLAD LGFIVADEAR HPFGTANACV FFSDGTYLEP LAVALREECE AAALDGNTFV ARDQAFRFRR GQEGLSAVVL GTPDAAEDHI RFRARGISGG EMLEFSRPMR LPDGREALGS FRLAFAADLR SPDLFLFTCQ RLRALPVDSS ALHHHENGVL GIAEVVLSEQ NPTDFQYLLQ EAVDEREVSA HSFGMDIQAG SAKITVLTPA GVEAFFGHAV EGAERGLRGR AVVFRVGDLE ATRALFAQND IEFAEMGGRL IVPEAPGQGV TFAFGV
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