Gene Smed_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0596 
Symbol 
ID5321432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp644934 
End bp646487 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content62% 
IMG OID640789532 
Producthypothetical protein 
Protein accessionYP_001326287 
Protein GI150395820 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGCGAA AGGGCGGCCG CCGACTCCCA CCGTGCCGCT GTATCGTCAT GAGTTCCGTT 
CCGACGCAGC CAGCTTCCGA GACGCCCCCC TTCCGCTTCG AAAACAGCTA TGCCCGCTTG
CCGGCGAACT TCTACGGGCG CGTTCAGCCC ACGCCGGTGA CGGAACCGTG GCTGATCAAA
TTCAATCGCC CGCTCGCGGA AGAGCTCGGA CTGGACGTCC GGGCCATCGA GTGCGATGGC
GCGGCGATCT TTTCGGGCAA TCTGATTCCC GAGGGTGCGG AGCCGCTCGC CATGGCCTAT
GCGGGCCACC AGTTCGGCAC CTTCGTGCCG CAGCTTGGCG ACGGACGTGC CATACTGCTC
GGAGAGGTGA CCGACACCAG CGGACGGCGG CGCGACATCC AGCTCAAGGG GGCCGGCCAG
ACGCCCTATT CCCGCCGCGG CGATGGACGG GCGGCGCTCG GACCAGTCTT ACGCGAATAT
GTCGTCAGCG AGGCGATGCA TGCGCTCGGC GTGCCGACGA CGCGCGCGCT GGCCGCAACA
GTGACGGGGC AACCCGTCTA CCGCGAACAG ATCCTACCCG GCGCGATCTT CACCCGGGTC
GCGGCAAGTC ATATCCGTGT CGGCACTTTC CAGTTGTTCG CTGCGCGCGG CGACATGGAT
TCGGTCAGGA TGCTCGCCGA CTATACGATC GACCGCCATT ATCCGGAGCT GAAGGACGAT
GAGAGAGCAT ACCTTGCGCT CTTCAAGGCG ATCGCCGCCC GCCAGGCCTC ATTGATTGCG
CGATGGCTGC ATGTCGGCTT TATCCACGGG GTCATGAACA CCGACAACAT GACGATTTCC
GGGGAGACCA TCGATTACGG CCCCTGTGCT TTCATGGACG GTTACGATTC GAAAACCGTA
TTCAGCTCGA TCGATCAGTT CGGCCGATAC GCCTATGCGA ACCAGCCTGC AATCGGCCAG
TGGAATCTCG CCCGCCTCGC AGAAACGATG GTAACGTTGT TCGATCCCGT TGCGGATACG
GCAGTGAATC TCGCCAACGA CGCTCTTGGC GAATACGGAA CAATCTTCCA GAAACATTGG
CTCGACGGCA TGCGGCGCAA GATCGGCCTT ATCACGGATG AAGACGAGGA TCTCGACCTC
GTGCAGTCGC TGCTGACTCT CATGCAGAAG GGCAAAGCAG ATTTTACCCT GACCTTTCGT
CGGCTTGCGG CATCCGCGGA GAACGTCGGA GCCGATATGG AGCTTGCAAG CCTGTTCGAG
GAACCGGAGG CGACCTCACC CTGGCTCGAG CGTTGGCGTC GGCGGCTGAC GCGGGAACCG
CAGATGGAAA TCGAGCGCGC TGCCTCGATG CGCGCCGTCA ACCCCGCGTT CATTCCACGT
AACCACCGAG TGGAACAGGC GATCAATGCC GCGACCGAAG ACGCGGATTT TTCCCTCTTC
GAAGCGCTTG TCGACGTGAC CTCCCGGCCT TACGAGGACC AGCCGGGCCG ATCTGCCTAT
GCCGCTCCCC CCAAGCCGGG CGAAGAAGTT CTGCAGACCT TTTGCGGCAC GTGA
 
Protein sequence
MPRKGGRRLP PCRCIVMSSV PTQPASETPP FRFENSYARL PANFYGRVQP TPVTEPWLIK 
FNRPLAEELG LDVRAIECDG AAIFSGNLIP EGAEPLAMAY AGHQFGTFVP QLGDGRAILL
GEVTDTSGRR RDIQLKGAGQ TPYSRRGDGR AALGPVLREY VVSEAMHALG VPTTRALAAT
VTGQPVYREQ ILPGAIFTRV AASHIRVGTF QLFAARGDMD SVRMLADYTI DRHYPELKDD
ERAYLALFKA IAARQASLIA RWLHVGFIHG VMNTDNMTIS GETIDYGPCA FMDGYDSKTV
FSSIDQFGRY AYANQPAIGQ WNLARLAETM VTLFDPVADT AVNLANDALG EYGTIFQKHW
LDGMRRKIGL ITDEDEDLDL VQSLLTLMQK GKADFTLTFR RLAASAENVG ADMELASLFE
EPEATSPWLE RWRRRLTREP QMEIERAASM RAVNPAFIPR NHRVEQAINA ATEDADFSLF
EALVDVTSRP YEDQPGRSAY AAPPKPGEEV LQTFCGT