Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0508 |
Symbol | |
ID | 5321342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 552143 |
End bp | 553456 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640789442 |
Product | hypothetical protein |
Protein accession | YP_001326199 |
Protein GI | 150395732 |
COG category | [S] Function unknown |
COG ID | [COG4325] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0148293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTGT CGCGGCTAGT GTGGACCATG ACTCGCATCC TTCGCCGGCT TTGGGTCCGG GCATCGCTCT ATTGCCTCGT CGCCATCGCA ACCGCTTTGG CCGCCATCTG GATCGGCCCC ATCCTGCCGG CAGCGTTTCC GAGCAAGGTC GGTGCCAAGG CAGTCGACGC GATCCTCTCG ATTATAGCAT CGAGCATGCT GGCGGTAACG ACCTTTTCAC TCAGCACACT GGTAGCGGCC ACGTCGGCAG CGGCAAGCAG CGCAACGCCG CGTGCCACGA GCCTGCTTCT CGAAGACGCG ACATCGCAAC GGGCGCTCTC CACATTTCTC GGTGCCTTCC TCTTCTCGCT GGTCGGCCTC ATCGCGCTCA ACACCGAACT CTACGACGAC GGCGGCCGTT TCGTGCTGTT CGTCGCTACT CTTGGCCTGG TCGCCATCAT CGTCGTAACA TTGCTGCGGT GGATAGACCA TCTCGCCGGG CTCGGGCATA TGGGAGAGAC GATCGGCCGT GTGGAGAAAG CGGCCACCGA GGCCTATAGA GCTCACACGC ACGCCCCTTT CCTCGGCGGA ACGCCCGCGG AAACGGTCCC CGAGGGCGCT ATAGCCATTC GCCACAAACG CATCGGCTAT GTGCAGCATC TCGACATGGG CGCTCTTTCG ACGGTCGCAG ATGAAGCGGA TGGCGACATC TACGTGACCC GGCGCCCGGG CCATTACTGC GATCCGGCAA GGCCCATCGC CTGGATCGCC CTCCGCGACA GATGCGCCAA GTTCGAAATC GACCAGTCTC GCCGTATCAG CGAAGCTTTT ACGCTCGGCA ATCGCCGTTC GTACGATCAG GACCCGCGCT TCGGTCTTAT CGCTCTTTCG GAGATCGCGT CCAAAGCGCT TTCTCCCGGT ATCAACGATT CCGGAACCGC CATCGACGTA CTGGCGACCC TGGTGCGTGT CTTGTCGCCC CCGCAGGGCG AAGATCCAAG CCCTGTCGCA AAGCCGGAAT ATGCGCGGGT TCACGTGGCG GCCCTTGAGG AGGACGACAT CATCGAAGCC GCCTTCATGC CTATCTCTCG CGACGGCGCG GCAATCCTCG AGGTGGCAAT CCGGCTTCAG AAGGCGCTGG CGGCAATCTG GGCCGGATGC GAGCCGCCGC TTGCCGGAGC AGCAAGACGA TTTGCCGCCG TGGCCCTGCA GCGGAGCCTT GAGTCGCTGA CCTTCGAGCC GGACAGGGAA CGGCTTCGAC GCGAGGCGCG CGCGTCGTTC AGAAAACCGA AACCAATGCT CGGAGAGCAG AATGCCTCAA CGCCTGACGC GTAG
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Protein sequence | MSLSRLVWTM TRILRRLWVR ASLYCLVAIA TALAAIWIGP ILPAAFPSKV GAKAVDAILS IIASSMLAVT TFSLSTLVAA TSAAASSATP RATSLLLEDA TSQRALSTFL GAFLFSLVGL IALNTELYDD GGRFVLFVAT LGLVAIIVVT LLRWIDHLAG LGHMGETIGR VEKAATEAYR AHTHAPFLGG TPAETVPEGA IAIRHKRIGY VQHLDMGALS TVADEADGDI YVTRRPGHYC DPARPIAWIA LRDRCAKFEI DQSRRISEAF TLGNRRSYDQ DPRFGLIALS EIASKALSPG INDSGTAIDV LATLVRVLSP PQGEDPSPVA KPEYARVHVA ALEEDDIIEA AFMPISRDGA AILEVAIRLQ KALAAIWAGC EPPLAGAARR FAAVALQRSL ESLTFEPDRE RLRREARASF RKPKPMLGEQ NASTPDA
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