| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0388 |
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| Symbol | |
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| ID | 5321222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 416148 |
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| End bp | 416885 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789323 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_001326080 |
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| Protein GI | 150395613 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.522888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCGCCA ATTTCCGCAT GCAGCGTCTC TTCGTCGAAA GCCCACTGCA CAATGGGGCG
AGCCACCAGG CAACGCGGGA GCAGTTTAAC TATCTGATCA ACGTGCTGCG CTTGGGCGAG
GGCTCGTCAC TTCTGGTGTT CAACGGCCGG GATGGCGAAT GGCGGGCGGA AATCTCCATG
CCGTCCCGCA AGCAGGCGGT CCTCGTCGCC GTCGAACAGA CGCGACCGCA GCCTGCCCCT
TGCGATCTCG TCTATCTGTT TGCACCCCTG AAGACAGGGC GGCTCGATTA TCTCGTGCAG
AAGGCGGTGG AGATGGGTGC CGGCGTCCTG CAACCTGTCA TAACGCAGCA TGTACAGGGG
AAGATCGGCA GCCTCGAACG CATTCGCGCC AATGCCATCG AAGCGGCCGA GCAGTGCGGC
GTCCTCGGCA TCCCGGCTGT CGAGGAGCCG CGTAGGCTCG AAGACCTTCT TGCGGCCTGG
CCGCGCGACC GGCGCATCGT GTTTTGTGAC GAGGGAAACG AGAGTCAGAA TCCCTTGCCT
ATCCTCAACG AATTAGCCGA GCACCGGCTG GCACTTCTGA TCGGCCCGGA GGGCGGTTTT
TCCGAGACGG AGCGAGATCT TCTGCGAAGC CTCGACTTCG TGACGGCAAT CCCTCTCGGG
CCGCGCATCC TGCGCGCCGA CACGGCGGCC GTGGCAGCAA TGGCCGTCAT TCAGGCTACG
CTCGGGGACT GGCGTTGA
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| Protein sequence | MRANFRMQRL FVESPLHNGA SHQATREQFN YLINVLRLGE GSSLLVFNGR DGEWRAEISM
PSRKQAVLVA VEQTRPQPAP CDLVYLFAPL KTGRLDYLVQ KAVEMGAGVL QPVITQHVQG
KIGSLERIRA NAIEAAEQCG VLGIPAVEEP RRLEDLLAAW PRDRRIVFCD EGNESQNPLP
ILNELAEHRL ALLIGPEGGF SETERDLLRS LDFVTAIPLG PRILRADTAA VAAMAVIQAT
LGDWR
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