Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0320 |
Symbol | |
ID | 5321153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 348806 |
End bp | 349633 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640789255 |
Product | response regulator receiver protein |
Protein accession | YP_001326013 |
Protein GI | 150395546 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.319961 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGAAGA CTGACGTGCC AGACCTGTCG ACGATTGCCT CTATCGTGGG GCAAATCGGG AGGCCGACAT TGCCGGAAGC CCTGGATGAG ATGCTTGCGA AAGTGGCCCG TTTCGACCTG TCGGCGATCT TCGGCTTTCC TTTCGATTCG CGGCCGCTGC TCTTGCACGA CGGCTACCGC CAGCACGCCG AACCGGCGGC ACTGAATGCA TATCTCGACG GCGCTTACCT GTTCGACCCG TTCTATACCG CCTGTGCGCA AAGCTTTCCT GCGGGCCTGT GGCGGATGCG TGAACTGGCT CCGGACCACT TCTTCGACTC CGAGTTCTAC AGTTCGAGAG AGGTTCATCC CTGCATATCC ATGCGGGCCG GATCGCTCGT CGAAGAGATC GGCTTCCTCA TCCCTTTGGA AGGTGGTTTC AACGCCGTGT ACTCGCTCAT GCGTTCGCAT GGGGCCCCTT TTTCAGGCGA CGAAATGGAC GGGCTGAAGC AGATCGAGCC GCTCGTGCGC GAAACGGTGC GATCACATTG GCGGGATGTA CGCGCGAGTG AACGTCAGCT TCGTCTCGAC GATCTCATGG AGACCGCCTT CGCGTCATTT TGCGAGGATC GTCTTACCTA TCAGCAACGG CGGATCGTGC AGCTTATCCT CAGAGGAAAC AGCAATTATG CAATCGGGCA GATCCTCTCG GTGACGGAGG GAACCGTCAA ACTGCACAGG CAGAACATAT ATAAGAGACT GAACATCTCG AGCCAGCGAG AGCTTTTCGC GATGTTCGTC GAACGGCTTC TTCCGCCTCT TCCACTCGAA GAGAGTGCAC GGGGATAG
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Protein sequence | MQKTDVPDLS TIASIVGQIG RPTLPEALDE MLAKVARFDL SAIFGFPFDS RPLLLHDGYR QHAEPAALNA YLDGAYLFDP FYTACAQSFP AGLWRMRELA PDHFFDSEFY SSREVHPCIS MRAGSLVEEI GFLIPLEGGF NAVYSLMRSH GAPFSGDEMD GLKQIEPLVR ETVRSHWRDV RASERQLRLD DLMETAFASF CEDRLTYQQR RIVQLILRGN SNYAIGQILS VTEGTVKLHR QNIYKRLNIS SQRELFAMFV ERLLPPLPLE ESARG
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