Gene Smed_0265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0265 
Symbol 
ID5321097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp284499 
End bp285686 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content62% 
IMG OID640789200 
Productflagellin domain-containing protein 
Protein accessionYP_001325959 
Protein GI150395492 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA TTCTCACCAA CAATTCCGCA ATGGCTGCGC TTTCGACGCT GCGCTCGATC 
TCTTCCAGCA TGGAAGACAC CCAGAGCCGC ATCTCGTCGG GCCTCCGCGT CGGTTCGGCC
TCCGACAACG CCGCCTACTG GTCGATCGCG ACCACCATGC GTTCCGACAA TCAGGCGCTC
TCCGCCGTTC AGGACGCCCT TGGCCTCGGC GCCGCCAAGG TTGATACCGC CTATTCCGGT
ATGGAATCGG CCATCGAAGT CGTTAAGGAA ATCAAGGCCA AGCTCGTCGC CGCCACCGAA
GACGGTGTCG ACAAGGCGAA GATCCAGGAA GAAATCACCC AGCTGAAAGA CCAGCTCACG
AGCATTGCCG AGGCGGCTTC GTTCTCCGGC GAAAACTGGC TTCAGGCGGA CCTCAGCGGC
GGCGCCGTCA CCAAGAGCGT CGTGGGGTCG TTCGTCCGTG ACGCAAGCGG TTCCGTATCT
GTCAAGAAGG TCGACTACAG CCTCAACGCC AACTCGGTTC TCTTCGATAC TGTCGGCGAC
ACCGGCATCC TGGACAAGGT CTACGACGTC TCGCAGGCAA GCGTTACGCT GACGGTCAAC
ACCAACGGCG TCGAATCGCA GCATACTGTT GCTGCCTATT CGCTGGAGTC TCTCACCGAA
GCCGGTGCGG AGTTCCAGGG CAACTACGCT CTTCAGGGCG GTAACAGCTA CGTCAAGGTC
GAGAACGTCT GGGTTCGCGC CGAGACCGCT ACAGCCGGTG CCACCGGTCA GGAAATCGCC
GCCACCACAA CGGCAGCCGG TACCATCACT GCCGACAGCT GGGTCGTCGA CGTTGACAAC
GCACCTGCCG TCAGCGTTTC GGCCGGTCAG TCCGTTGCCG GGATCAACAT CGTCGGAATG
GGGGCAGCCG CCCTCGATGC GCTGATCAGC GGTGTCGACG CTGCACTGAC CGACATGACC
AGCGCTGCCG CCTCGCTCGG CTCCATCTCC TCGCGCATCG ACCTGCAGAG CGAATTCGTC
AACAAGCTCT CGGACTCGAT CGACTCGGGC GTTGGCCGTC TCGTCGATGC GGACATGAAC
GAGGAATCGA CCCGCCTCAA GGCTCTGCAG ACCCAGCAGC AGCTCGCCAT TCAGGCCCTG
TCGATCGCCA ACTCGGACTC GCAGAACGTC CTGTCGCTCT TCCGCTAA
 
Protein sequence
MTSILTNNSA MAALSTLRSI SSSMEDTQSR ISSGLRVGSA SDNAAYWSIA TTMRSDNQAL 
SAVQDALGLG AAKVDTAYSG MESAIEVVKE IKAKLVAATE DGVDKAKIQE EITQLKDQLT
SIAEAASFSG ENWLQADLSG GAVTKSVVGS FVRDASGSVS VKKVDYSLNA NSVLFDTVGD
TGILDKVYDV SQASVTLTVN TNGVESQHTV AAYSLESLTE AGAEFQGNYA LQGGNSYVKV
ENVWVRAETA TAGATGQEIA ATTTAAGTIT ADSWVVDVDN APAVSVSAGQ SVAGINIVGM
GAAALDALIS GVDAALTDMT SAAASLGSIS SRIDLQSEFV NKLSDSIDSG VGRLVDADMN
EESTRLKALQ TQQQLAIQAL SIANSDSQNV LSLFR