| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0186 |
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| Symbol | |
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| ID | 5321016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 205222 |
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| End bp | 206415 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789119 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001325880 |
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| Protein GI | 150395413 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCT GGAAAATAGG CACCGCTCTC GCGGCATCGC TTCTGGCAAG CACCGCATCG
GCGGAAACCG TTCGTTTCTG GTATCACTTC GACAATCCGG AAAACCCGAT GGCCGATCTG
ATCGCGAAAT TCGAAGCGGC CAATCCGGGT ATCGAGATCG AAGCGGAAAA CGTTCCGTGG
AACAGCTACT ACGATAATCT CTACACCGCG CTCGTCGGCG GCAACGCGCC GGACGCCGCG
ATGGTCAAGC TCTTCGCCCA GCCGCGCCTC ATCGAAATGG GCGCGCTGGA GCCGCTCGGC
GAGCGCATTG ACGGCTGGGC CGGCAAGGCG GACCTGCTCG ACAACCTCCT CGACCTCAAC
AAGGGGTCGG ACGGTCAGCA GTACTACCTG CCGATCCAGT ATGTCGTGCT TTATCTTTAC
TACCGCGCCG ACCTGTTCGA CGCCGCCGGC CTGAAGCCGC CGGCGACCTG CGACGCGTTC
CGCGACGCGG CGATCAAGCT CACCAAGCAG CCGGCGACCT ACGGCTTCGG CCTGCGCGGC
GGCAAGGGTG GCTGGGACCA GTGGGGGGCC TTCGTGCTGT CGCAGGGCGC GAAGCTTGAG
CCGGGCGGTC TGACGACGCC GCAGGCGATC GCTGCCAACC AGTGGCTGAT CGATCTGTTC
CAGAAGGACA AGGTCATTCC GCCCTCGGCA CCGAATGACG GCTTCCAGGA AATCACCGCC
GCCTTCAAGA AAGGGACCAC GGCCATGACC ATTCATCATG TCGGCTCGTC GAACGACATG
GTCAAGGCAC TCGGTGACAA GGTCTCGGCG GTGCCGTTGC CGGAATGCGG CGGCGGCCGC
TGGACGTCCT ATGGCGACGA GTCGTTGGCT ATCTTCTCCT CCTCGGAGGT GAAGGATTCC
GCGTGGAAGT GGATCTCGTT TCTTGCCGAG GGCGAGAACA ACGTCGCCTT CAACAAGGCG
ACCGGGCAAA TGACGGTGAC CAAGAGCGGT TCGGAAAATT GGACGCTGCA TGAGCGCCGC
TTTGTCGATG CGACGGTACA ATCGCTGCCC TTCGCCCATG TGCTGCCGCA GAACACCGCG
ACGTCCGAGT TCGTCAACAC GGCCTGGCAA ACGGCCATGC AACAGGCGCT GACGGGCCAG
ATCACCTCCG AAGAGATGAT GAAGCAGCTC GAAGCTCTTT TCGTGCAGCA ATGA
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| Protein sequence | MKIWKIGTAL AASLLASTAS AETVRFWYHF DNPENPMADL IAKFEAANPG IEIEAENVPW
NSYYDNLYTA LVGGNAPDAA MVKLFAQPRL IEMGALEPLG ERIDGWAGKA DLLDNLLDLN
KGSDGQQYYL PIQYVVLYLY YRADLFDAAG LKPPATCDAF RDAAIKLTKQ PATYGFGLRG
GKGGWDQWGA FVLSQGAKLE PGGLTTPQAI AANQWLIDLF QKDKVIPPSA PNDGFQEITA
AFKKGTTAMT IHHVGSSNDM VKALGDKVSA VPLPECGGGR WTSYGDESLA IFSSSEVKDS
AWKWISFLAE GENNVAFNKA TGQMTVTKSG SENWTLHERR FVDATVQSLP FAHVLPQNTA
TSEFVNTAWQ TAMQQALTGQ ITSEEMMKQL EALFVQQ
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