| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0134 |
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| Symbol | |
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| ID | 5320963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 148315 |
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| End bp | 149412 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789067 |
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| Product | 2'-deoxycytidine 5'-triphosphate deaminase |
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| Protein accession | YP_001325829 |
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| Protein GI | 150395362 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.338998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCGCG AAACAGGGAT TTTGGCCGAC CGCGCAATTG CAGCGCTGTT CGGCTCGGGA
CGTCTGAAGA GCGAGAAGGC GCTGGATGGG GACCAGATTC AGCCGGCCAG CCTCGATCTT
CGCCTTGGAT CCACGGCATT CCGTGTCCGG GCAAGCTTCA TGCCCGGCCC TTCTCATCTG
GTGGCCGACA AGCTCGATCG CCTGAAACTG CATGTCATTG ATCTCAGCGA CGGCGCGGTG
CTCGAAACCG GCTGCGTCTA TATCGTACCG CTGATGGAGA GCCTGTCGCT GCCGGCGAAC
ATGTCCGCCT CCGCCAATCC GAAAAGCTCA ACCGGCCGAC TCGACATCTT TACACGGGTG
ATCACCGACA GGGCGCAGGA GTTCGACAAG ATCCCGGCCG GCTACAGCGG TCCGCTCTAT
CTCGAAATCA GCCCGCGAAC CTTTCCGATC GTCGTCAGGC GCGGGTCGCG GCTTTCGCAG
ATACGCTTCC GCGTCGGACA CGCGGTTCTC TCCGAGCAGG AACTGCTGGC CCTTCATGAA
AGCGACGTGC TCGTTGCAAG CGATCGGCCA AACGTCTCCG GCGGCGGGAT CGCCCTTTCC
ATCGACCTCA AGGGCACCGG CCCCGACGGG CTGATCGGCT ATCGCGGCAA GCATCACACA
TCGGTCGTCG ACGTCGACAA GAAAGCCCAG CATGCGGTTT TCGATTTCTG GGAGCCCCTC
TACAGCCGCG GCCGCGATGA CCTCATCCTC GACCCGGACG AATTCTACAT CCTCGTTTCC
CGCGAGGCCG TTCATGTACC GCCACTCTAT GCCGCCGAGA TGACGCCGTT CGATCCGCTG
GTGGGCGAGT TCCGCGTTCA TTATGCCGGT TTCTTTGACC CCGGGTTCGG CCATGCGTCG
GCCGGCGGCA GCGGCAGCCG GGCGGTGCTC GAAGTCCGCA GTCACGAGGT GCCGTTCATT
CTGGAGCATG GCCAGATCGT CGGCCGTCTC ATCTACGAAC ACATGCTGGA CCGCCCGGAG
GGGCTTTACG GCCTCGACCT CGGCTCCAAT TATCAGGCGC AGGGGCTCAA GCTCTCTAAG
CATTTTCGCG CGGAATGA
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| Protein sequence | MGRETGILAD RAIAALFGSG RLKSEKALDG DQIQPASLDL RLGSTAFRVR ASFMPGPSHL
VADKLDRLKL HVIDLSDGAV LETGCVYIVP LMESLSLPAN MSASANPKSS TGRLDIFTRV
ITDRAQEFDK IPAGYSGPLY LEISPRTFPI VVRRGSRLSQ IRFRVGHAVL SEQELLALHE
SDVLVASDRP NVSGGGIALS IDLKGTGPDG LIGYRGKHHT SVVDVDKKAQ HAVFDFWEPL
YSRGRDDLIL DPDEFYILVS REAVHVPPLY AAEMTPFDPL VGEFRVHYAG FFDPGFGHAS
AGGSGSRAVL EVRSHEVPFI LEHGQIVGRL IYEHMLDRPE GLYGLDLGSN YQAQGLKLSK
HFRAE
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