| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0052 |
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| Symbol | |
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| ID | 5320879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 55019 |
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| End bp | 55939 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640788983 |
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| Product | ribokinase-like domain-containing protein |
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| Protein accession | YP_001325747 |
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| Protein GI | 150395280 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00000666375 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCACTG TTTTTGGGTC CATCAATATG GACCTGATCG CCACGACCGC TCGCCTTCCG
AAGCCCGGCG AGACGGTCGC CGGAACAGGC TTTTCCACTG CGGCAGGCGG CAAGGGAGCA
AACCAGGCGC TCGCCGCGCG CCGTGCCGGC GCCTCGGTAC AGATGGCAGG TGCGGTCGGG
TCCGACGCCT TCGCCGAGGG AGCGCTGGCG CTGCTGAGAG AGGCGGGCAC CAATCTTGAT
CTGACGAAGA CCGTCGCGGA GCCGACCGGT ACGGCGCACA TCATCGTCGG CGGCGATGGC
GAAAACGTCA TCGTCGTGGT TGCCAGCGCC AATGCGATCG TGAGCGAGGA CGACGCTGCG
AGCGCGGTCG AAAAGATGTC GCCCGGCGAC ACGCTGATGC TGCAGCTGGA AATCCCCGCA
GCCTCGGTGG AAAAGGCCCT TGCTGAAGCA AAGCGGCGGA ACGTTCGTTC GATCATCAAT
ATAGCGCCGC TGACGCCCGA TGCGGCCCGC CTCGGTCGCA GCGCCGATTT CGTCATCGCC
AACGAAACGG AGTTCGAGCT GCTCGCTGGG AAATCGGGCA TCACCGGCAC CGAGCGGGAA
GAGGCGATGA AGCAGCTGCA TGCAGAGACA GGTCAGTCAG TCATCGTTAC GCTCGGCGCC
GAGGGCGTGG TGGCGTTCCA CGAAGGCGAC CTCCATCGTG CCAAAGGACT GACGATAGAG
CCCGTCGACA CCGTGGGTGC CGGCGATACG TTCTGCGGCT ATCTCGCCGC CGGCCTCGAC
GCCGGCCTCG ACTTCGCCGA GGCTCTGCGC CGCGCTGCGG TTGCGGGCTC GCTCGCCTGC
CTCAAGCCCG GCGCCCAGCC CTCGATCCCG CTTGCCGCCG AGGTCGCTGC CCGGCTCCAG
AGCAATTCCG CGATTGCGTA G
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| Protein sequence | MITVFGSINM DLIATTARLP KPGETVAGTG FSTAAGGKGA NQALAARRAG ASVQMAGAVG
SDAFAEGALA LLREAGTNLD LTKTVAEPTG TAHIIVGGDG ENVIVVVASA NAIVSEDDAA
SAVEKMSPGD TLMLQLEIPA ASVEKALAEA KRRNVRSIIN IAPLTPDAAR LGRSADFVIA
NETEFELLAG KSGITGTERE EAMKQLHAET GQSVIVTLGA EGVVAFHEGD LHRAKGLTIE
PVDTVGAGDT FCGYLAAGLD AGLDFAEALR RAAVAGSLAC LKPGAQPSIP LAAEVAARLQ
SNSAIA
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