| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3993 |
|---|
| Symbol | |
|---|
| ID | 6474877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 4499625 |
|---|
| End bp | 4501730 |
|---|
| Gene Length | 2106 bp |
|---|
| Protein Length | 701 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642733196 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
|---|
| Protein accession | YP_002030375 |
|---|
| Protein GI | 194367765 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.311816 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATTG CATCTTCCCG CCCCCCCGAT ACCGCCCGCC TGCCACATCT GCAGCAGCTC
GCGCGCAGTG CTGATCGTCG CCTTCTGCTT GGCAGTGCGG CCCTGGCCGT GGCCGGCCTG
CTGCTGGCTG TGCGCGGCCC GCAGGTGCTG AGCGCCTCGT TGGCCGCCGT CGCGGTATTG
CCTGCCGTGT GGCTTGCTGG CCCGCAGGCG GGTCAGGCCA TCGCCCGCAA TGGCCTGGCG
CTGCTGTTGT CACTGCAGTT GACGCTGTTG TGTGCGATCA CCGGTCTGTC GCCGGCGCTG
CCGATTGCAC TGCTGCTGGG CGCGCTGCTG GGTCATCGCG ATCGCCTGCC GGTGTGGTTG
GCCGGTGGTG TCGGCACGCT CGCACTGCTG GCGCCGATGC TGGATGGCGC TGCGGTGCTG
CCGACCGTGC TGCCGGCCGC CCTGCTGGCC GGCCTGACCC TGTTCCTTGG CCAGGTCGCG
CTGCGCCTGC GCCAGCAGAC CGAAGCCCTC GGCCACGGTC CACGCCGACT GGCCGCGCTC
GCGCGTGATA TCGCCACCGG CGCCGATCTC GGTGCACACA CGGACACGAG CGCCTATGCC
CCGGGCTCGC TGGCGCACGC GCTGGCCGAT ACCGCCCGCC ACGTGCAGGC GCAGCGCGGC
CGCGAAGCAG AGGCCAATGC CGAGAACGCA CAGATCCGCC AGGCACTGGA TGCATCGCGC
ACGGCAATGA TGATTGCCGA CAATGATCAC GTGATCCGCT ACGTGAACCG CTCGGTGGTG
GCCCTGCTGC GCAACCAGCA GGCCACCCTG CGCCAGGCGT TTCCCGATTT CGACGCCGAA
CGCCTGGTTG GCAGCAGCAT CCATCGCTTC CATGCCAACC CTGACCGCAT CCGCGCCATC
CTCAACGGCC TGCAGGTGAC CCACAACGGC AAGGTGCAGA TCGGCCCGGT GCACTTCGCA
CAGGTAGTCA CCCCGGTGTT CGACGCGCAG GGCGCGCGGC TGGGCTTCGC CGTGGAGTGG
CACGACCGCA CCCATGAGCT GGCCCTGGAA AACGCAGTTG CCGGCATCGT CGCTGCAGCT
GCCGCGGGTG ATCTCGATCA GCGCCTGCAG GCCAGCGAGG GCGCCAGCTT CCTGGATGGG
CTGACCGGTG GCATCAATCA GCTGCTCGAT ACCTTGGGCG GCACTATCGA TGAAGTGCGG
CAGATGCTTT CGGCCCTGGC CAACGGTGAT CTCGACCGGC GCATGCACGG TGAATACCAC
GGTGCCTTCG CTGCGATCCA GCGCGACGCC AATGCCACCG CCGGGCAGTT GGCGCGGATG
GTCGGCCACA TCCAGCAATG CGCGGCGTCG ATCAGCACCG CAGCCAGCGA GATTGCCGCC
GGCAACGGCG CGCTGTCCGA ACGCAGCGAG CGTCAGGCCG CGCACCTGCA GGAAACCGCG
GCATCGATGG AGGAACTGAC GGCCACGGTG CGCCAGAACG CCGCCCACGC GCGGGAAGCC
AGTACGTTGG CGGCCGCCAC GCAGAGCGCG GCCAGCGACG GCAACGCCGC GATGCAGCAG
GTGGTCGACA CCATGCAGGC CATCGAGGGC GCGTCGAAGC GGATCGGCGA CATCACCGGC
GTCATCGACG GTATCGCCTT CCAGACCAAT ATCCTGGCAC TGAACGCCGC GGTGGAAGCA
GCACGGGCCG GCGAGCAGGG CCGCGGCTTT GCCGTGGTCG CCAGCGAGGT TCGCGTCCTG
GCACAACGTT CGGCTGCTGC AGCCCAGGAG ATCAAGAAGC TGATCGACGA AGCAGGTCGC
CAGGTCGGCG ACGGTGCACA GCAGGTGGCC GACGCCGGCC AGCGCATGCA GGGCATCGTG
GGCGGCGTGG AGAACGTCAG TCACCTGATG CGTGAGATAT CGGCCGCCTC CCAGGAGCAG
TCGATCGGTA TCGAACAGAT CAACCAGACC GTGGTGCAGA TGGACCAGGC AACCCAGCAG
AACGCTGCGC TGGTGGAGGA AGCGACCGCC GCGGCGCGCG AGCTGCAGTC GCAGGCCGGA
ACGCTGACCG AAGCGGTATC GGTGTTCCGC CAGCAGTCAC CGCAGGGGAT TGCCCTGGTC
GCCTGA
|
|---|
| Protein sequence | MSIASSRPPD TARLPHLQQL ARSADRRLLL GSAALAVAGL LLAVRGPQVL SASLAAVAVL
PAVWLAGPQA GQAIARNGLA LLLSLQLTLL CAITGLSPAL PIALLLGALL GHRDRLPVWL
AGGVGTLALL APMLDGAAVL PTVLPAALLA GLTLFLGQVA LRLRQQTEAL GHGPRRLAAL
ARDIATGADL GAHTDTSAYA PGSLAHALAD TARHVQAQRG REAEANAENA QIRQALDASR
TAMMIADNDH VIRYVNRSVV ALLRNQQATL RQAFPDFDAE RLVGSSIHRF HANPDRIRAI
LNGLQVTHNG KVQIGPVHFA QVVTPVFDAQ GARLGFAVEW HDRTHELALE NAVAGIVAAA
AAGDLDQRLQ ASEGASFLDG LTGGINQLLD TLGGTIDEVR QMLSALANGD LDRRMHGEYH
GAFAAIQRDA NATAGQLARM VGHIQQCAAS ISTAASEIAA GNGALSERSE RQAAHLQETA
ASMEELTATV RQNAAHAREA STLAAATQSA ASDGNAAMQQ VVDTMQAIEG ASKRIGDITG
VIDGIAFQTN ILALNAAVEA ARAGEQGRGF AVVASEVRVL AQRSAAAAQE IKKLIDEAGR
QVGDGAQQVA DAGQRMQGIV GGVENVSHLM REISAASQEQ SIGIEQINQT VVQMDQATQQ
NAALVEEATA AARELQSQAG TLTEAVSVFR QQSPQGIALV A
|
|---|
| |