Gene Smal_3915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3915 
Symbol 
ID6474799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4410973 
End bp4411602 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content68% 
IMG OID642733118 
Productouter membrane lipoprotein carrier protein LolA 
Protein accessionYP_002030297 
Protein GI194367687 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2834] Outer membrane lipoprotein-sorting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0708883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGAG CGAACCGTTT TGCGCGCGCA CTGCTGTGCG CGTTGCTGCT GCTGGCCGCA 
CCGCTGGTGC AGGCGGCCGA CCCCGCCATC GATGCGATCA CCCAGGCGGT GGCGCGGCCG
GACGTGCTGC GTGGCCAGTT CAGCCAGGAA AAGCAGGTCA GCGGCTTCAA GAACCCGCTG
CGCTCGCAGG GCCGGTTCGT GGTCGCGCGC CAGCACGGCG TGATCTGGTC CACGCTCAAG
CCGTTCCCCT CCGAGGTGGT GGTCACCGCC GACCGCATCC TCAGCCGCCA GCGCGATGGC
AGCGCCCGCG TCGAACTCGA TGCACGGCAG CAACCGGCGA TGCGTTCGGT GAACGCGATC
ATGTTCGCGC TGATGAGTGG CGACGTGCAG GCGCTGTCCA GCCAGTTCAA CGTGGCGGCC
AGTCGTGAAG GGCAGGGCTG GCGGCTGCGG CTGACGCCGA AGTCGGCGAT GCTGGCCAAG
GCTTTCGAAT CGCTGACCCT GCAGGGCGAC CGCTATGTGC GCCAGGTCGA GATCGTGGAG
GCCAACAAGG ACCGCACGCA GATCCAGTTC AGCGTGTTGA GCGAGACGCC GGCCACGCTC
AATGCCGACG AGGCCCGCCG CTTTGAGTGA
 
Protein sequence
MNRANRFARA LLCALLLLAA PLVQAADPAI DAITQAVARP DVLRGQFSQE KQVSGFKNPL 
RSQGRFVVAR QHGVIWSTLK PFPSEVVVTA DRILSRQRDG SARVELDARQ QPAMRSVNAI
MFALMSGDVQ ALSSQFNVAA SREGQGWRLR LTPKSAMLAK AFESLTLQGD RYVRQVEIVE
ANKDRTQIQF SVLSETPATL NADEARRFE