Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3915 |
Symbol | |
ID | 6474799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 4410973 |
End bp | 4411602 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642733118 |
Product | outer membrane lipoprotein carrier protein LolA |
Protein accession | YP_002030297 |
Protein GI | 194367687 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0708883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCGAG CGAACCGTTT TGCGCGCGCA CTGCTGTGCG CGTTGCTGCT GCTGGCCGCA CCGCTGGTGC AGGCGGCCGA CCCCGCCATC GATGCGATCA CCCAGGCGGT GGCGCGGCCG GACGTGCTGC GTGGCCAGTT CAGCCAGGAA AAGCAGGTCA GCGGCTTCAA GAACCCGCTG CGCTCGCAGG GCCGGTTCGT GGTCGCGCGC CAGCACGGCG TGATCTGGTC CACGCTCAAG CCGTTCCCCT CCGAGGTGGT GGTCACCGCC GACCGCATCC TCAGCCGCCA GCGCGATGGC AGCGCCCGCG TCGAACTCGA TGCACGGCAG CAACCGGCGA TGCGTTCGGT GAACGCGATC ATGTTCGCGC TGATGAGTGG CGACGTGCAG GCGCTGTCCA GCCAGTTCAA CGTGGCGGCC AGTCGTGAAG GGCAGGGCTG GCGGCTGCGG CTGACGCCGA AGTCGGCGAT GCTGGCCAAG GCTTTCGAAT CGCTGACCCT GCAGGGCGAC CGCTATGTGC GCCAGGTCGA GATCGTGGAG GCCAACAAGG ACCGCACGCA GATCCAGTTC AGCGTGTTGA GCGAGACGCC GGCCACGCTC AATGCCGACG AGGCCCGCCG CTTTGAGTGA
|
Protein sequence | MNRANRFARA LLCALLLLAA PLVQAADPAI DAITQAVARP DVLRGQFSQE KQVSGFKNPL RSQGRFVVAR QHGVIWSTLK PFPSEVVVTA DRILSRQRDG SARVELDARQ QPAMRSVNAI MFALMSGDVQ ALSSQFNVAA SREGQGWRLR LTPKSAMLAK AFESLTLQGD RYVRQVEIVE ANKDRTQIQF SVLSETPATL NADEARRFE
|
| |