Gene Smal_3871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3871 
Symbol 
ID6474754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4358487 
End bp4359197 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content60% 
IMG OID642733073 
Productprotein of unknown function DUF1568 
Protein accessionYP_002030253 
Protein GI194367643 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGAC AAGCACGCCT GATGCTGGCC GGCCAGCCTT ACCATGTAAC CCAGCGCGGA 
GTGAACAAGG GGGCGATCTT CGTTGACGAT ATAGACCGCC AGTTGTTTCT GCATCTGTTG
CACGGCGCCT TCCTGAAACA CCATGTCGCG CTGCACGCAT ACGTACTGAT GGGCAATCAC
GTCCATCTAT TGGCCACACC CTCCACTCAG GTCGGCTTGG CCAACGCGAT GCGGATGCAG
GGCAACAACT ATGTCCAGGC GTTCAATCAG CGGCATGAGC GCAGCGGACC TCTCTGGCAG
GGCCGATTCC ATTCTTCGAT GGTGGACAGT GATGCCTACT TGCTCAGCGT CTATCGCTAC
ATCGAACTCA ATCCCGTTCG CGCAGGCATG GCAGCCCATG CGGAAGATCA CCCATGGTCG
AGCGTGCATG GAAACCTGCA GCGCCGCGAT GATCCGATGC TGACGGAACA TCCCGCCTTT
CAGGCACTGG CCCCGACCAA GCGACAGCGG ACGACGCTCT ATGCGCAGTT CCTGCGGGAT
CTGAATGCGT CCGCCGACCT GCCTGCAATC CGCGCCCACA GTACTGCGCA ACATCCATTG
GGAAATGCGA CGTACTTGCA AATGGTGGAA GAAACACTGG GGCGACCGGT GGTGCTGCGC
AAGCGGGGAC GCCCCCGAAA GGCGGGGATG GGAGAGGCAG AAACGACTTA A
 
Protein sequence
MPRQARLMLA GQPYHVTQRG VNKGAIFVDD IDRQLFLHLL HGAFLKHHVA LHAYVLMGNH 
VHLLATPSTQ VGLANAMRMQ GNNYVQAFNQ RHERSGPLWQ GRFHSSMVDS DAYLLSVYRY
IELNPVRAGM AAHAEDHPWS SVHGNLQRRD DPMLTEHPAF QALAPTKRQR TTLYAQFLRD
LNASADLPAI RAHSTAQHPL GNATYLQMVE ETLGRPVVLR KRGRPRKAGM GEAETT