Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2626 |
Symbol | fumC |
ID | 6477116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 2930696 |
End bp | 2932123 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642731812 |
Product | fumarate hydratase |
Protein accession | YP_002029009 |
Protein GI | 194366399 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0946785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.393755 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAG CTGCAAGCAA GGGTTTCAGA ATCGAACACG ACAGCATGGG CGAGCTGCAG GTGCCTGCGG ACGCCCTGTG GGGCGCACAG ACCCAGCGTG CCGTGCAGAA TTTCCCGGTG TCGGGCCAGC GCATGCCGCG CGGTTTCATC CGCGCGCTGG GCCTGGTCAA GGGCGCCGCC GCGGGCGTCA ACGCAGAGCT GGGCCACCTG CCGAAGAACG TGGCCAAGGC CATCCAGACC GCCGCGGCCG AAGTGGCCAC CGGTGAATGG GACGCGCATT TCCCGATCGA CGTCTACCAG ACCGGTTCGG GCACGTCGTC GAACATGAAT GCCAATGAGG TCATCGCCAC CCTGGCCAAC CGTGCCGGCA AGGCGGGCAA GACCAGCGTG CACCCCAACG ACCACGTCAA CCAGGGGCAG AGCTCCAACG ACGTGATCCC GACCGCGCTG CGCGTGTCGG CGGTGCTGGC GACCCATGAG CAGCTGCTGC CGGCGCTGGT ACACCTGCGC AAGACCCTGG ACAAGAAGGG CCGCAGCCTG CGCAAGGTGG TCAAGACCGG CCGTACCCAC CTGATGGATG CGATGCCGCT GACCTTCGAG CAGGAGTTCG GCGCGTGGTC GGCACAGCTG GCGTCGGCGC AGGAGCGTAT CGAAGACAGC CTCAAGCGCG TGCGTCGCCT GCCGCTGGGC GGCACCGCCA TCGGCACCGG TATCAACGCC GATCCGCGCT TCGGTACCCA GGTGGCGAAG GCGCTGAAGC AGCAGACCGG TTTCAAGTTC GACAGTGCCG AGAACAAGTT CGAAGGCCTG GCCGCGCAGG ACGATGCGGT GGAACTGTCC GGCCAGCTCA ATGCGCTGGC GGTGGCACTG ATCAAGATCG CCAATGACCT GCGCTGGATG AACGCCGGTC CGCTGGCTGG GCTGGGCGAG ATTGAACTGC CGGCCCTGCA GCCGGGCAGC TCGATCATGC CGGGCAAGGT CAATCCGGTC ATTCCGGAAG CGACGGTGAT GGCTTGTGCA CAGGTGATCG GCCACCACAC CGCCATTACC GTGGCCGGCC AGACCGGCAA CTTCCAGCTC AATGTCACGT TGCCGCTGAT CGCGGTGAAC CTGCTCGATG GCATCGGCCT GCTGGCCAAT GTGTCCACCC TGCTGGCCGA CAGCGCGATT GCCGGGCTGA AGGTGCGCGA GGACCGCGTG GCCGAGGCGC TGGCACGCAA CCCGATTCTG GTCACCGCAC TGAACCCGAT CATCGGCTAC GAGAAGGCCG CGGCGATTGC CAAGCGCGCC TACAAGGAAC AGCGCCCGGT GCTGGACGTG GCGCTGGAAG ACAGTGGCCT GGCCGAAGCC GAGCTGCGCC GCCTGCTGGA TCCGACCGCG CTGACCGCCG GTGGCATCCA GGCCGGTGGT GGTGGCGCGG GCGGTTGA
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Protein sequence | MSKAASKGFR IEHDSMGELQ VPADALWGAQ TQRAVQNFPV SGQRMPRGFI RALGLVKGAA AGVNAELGHL PKNVAKAIQT AAAEVATGEW DAHFPIDVYQ TGSGTSSNMN ANEVIATLAN RAGKAGKTSV HPNDHVNQGQ SSNDVIPTAL RVSAVLATHE QLLPALVHLR KTLDKKGRSL RKVVKTGRTH LMDAMPLTFE QEFGAWSAQL ASAQERIEDS LKRVRRLPLG GTAIGTGINA DPRFGTQVAK ALKQQTGFKF DSAENKFEGL AAQDDAVELS GQLNALAVAL IKIANDLRWM NAGPLAGLGE IELPALQPGS SIMPGKVNPV IPEATVMACA QVIGHHTAIT VAGQTGNFQL NVTLPLIAVN LLDGIGLLAN VSTLLADSAI AGLKVREDRV AEALARNPIL VTALNPIIGY EKAAAIAKRA YKEQRPVLDV ALEDSGLAEA ELRRLLDPTA LTAGGIQAGG GGAGG
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