Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1934 |
Symbol | |
ID | 6476041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 2174948 |
End bp | 2176891 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642731116 |
Product | hypothetical protein |
Protein accession | YP_002028321 |
Protein GI | 194365711 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.279143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.581278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCACC CCGTACCAAG CGCGCTGGCA CTGGCGCTGG CAGCCTTCCT GGCTGCCGGC CCGGCACTGG CAGAAACCGC CACCTCCGCG CCCGCCACGG CGCCGCCTTC CACCAGCGGC GATACCGAAG CCAGCAATAA TTTCAGCATT GTCCGTTACC GCGCCGACTA CCAGGTGCGG CCCGATGCGG GCAATGTGCA GACCGAAACC TACGAAGTCC TGCTCAAGAC CAAGGCCTCC GTCGAGCAGT TCAGCCAGGT GCGGCTGAGC TACAGCGAGA AGATGGAGAC GCTGGAAGTG CTCGGCGCCT ACACCATCAC CGCCGATGGT CAGCGCCGCG ACGTCCCCGC CGACCGCATC TACACCCAGG AGAGTTACTC CAGCGCCTCG GCGGCGATGT ATGCCGACCG CAAGGTGCGG GTGATCGTGT TCCCGAACCT GGCCCCGGGC ACGCGCCTGT ACTACCAGGT GCGTCGCACC CAGGCCACGC CGTACTTCCC GGGCTATTTC GGCCTGTGGG AGACCTTCAA CGTCTTCACC GAGTACGAGG ACGCGGAGGT CACCCTGAGT GCGCCGGCCA ACCTGCCGAT GTTCGTCGAC AGCCGTGGTG TGCAGGGCAG TGATCGCCCG ACGGTGAAGA ATGGCCAGGC GCAGTGGCGC TGGCGCTACC AGCGGCGCGA GGCCATGCCA GCGCAGAACT GGTCAGCGGC AGGCTGGGAG TTCGGCCCGA ATATCATGGC CAGCACCTAT CGTGACTGGT CGCAGATGGG CCGTGCCTAC CAGCTCAAGG CTGGCCCGGC CGCGCAGGTC ACCCCGGAAC TACAGGCGCT GGCCGACCAG ATCACCACCG GCATCAGCGA CCGCCGCGAG CAGGCCGACG CGCTGTACCG CTGGGTCGCG CAGAACATCC GCTATGTGGC GGTGTACCTG GGCAATGGCG GCCTGGAGCC GAACAGCGCG CAGAGCGTCC TCGACAACCA CTATGGTGAC TGCAAGGACC ATGTGACGAT CCTGGAGGCG CTGCTGGCGG CCAAGGGTAT CGCCAGTTCG CCGGTGCTGA TCGGTGCCGG CGGTGGCCCG ACCCTGCCGA AGATCCCGGT ACTGGGCCGC TTCAATCACG CCATCACCTA CATCCCCGAG TTCGACCTGT ACCTGGATTC GACCACCGCC TGGGCGCGCT TCGGGCAGTT GCCGGAAGGT GACCTGGGCG CACCGGTGAT GCGCACCCGC GATGCGAGCC TGGCGCGCAC CCCGGCCAAC ACGCCGCAGC GCAATGCCAC TTCGATGGAA GTGCGCTTCA CCTTCGACGC CAATGGCAAC CTGCGCGGCG AGACCATTCC GAAGCTGGGC GAGAACGCCG AAATCGGCAT GCGTGCCCAG TTCTCCCAGC TCAACGCGCA GAACCGCGCG CGCGCCGAGG AGCAGATCAT GGCCGCGTCC GGTTTCGACG GGCGAGGGCA GCTACAGATC CAAGGCGTGC CGGTCGACCT GACCCGGCCG TTCGGCTACC GCATGGCCTT CCAGGCTGAG GACTACGCCG ACTTCAGCGT GGCCGGCGGC ATGGCCGTGC CGGACCCGCC GGGTGGTGAA TCGGTGCGCG GCCTGTACGC CACCGCCTCG GCACCGGCCA ATGAGGCGCC GTTCTACTGC AATGCCAGCC TGCGCGAGGA AACCTATCGC CTGCAGTTCC CGGCCAATGC GCCGATCATC GCCATCCCGG CCAGCCAGCG CTTCACCAAC GCCGCCGGTG AGTACCGGGT GGACTGGAGC CGCGAAGGCC AGGACGTGAT CGTGCACCAC CGCCTGCAGC AGAATGCGGT GCGTGGCCCG GAGGCGTTGT GCCAACCGCA GGACTACCCG GCGTTCCGCG CGCTGTATCG AGAAGTGCGG CGTGGCTTCC GTGGCCAGGT GCTGTACGGC AGGCTGCCGG CCGCTGCCGA CTGA
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Protein sequence | MLHPVPSALA LALAAFLAAG PALAETATSA PATAPPSTSG DTEASNNFSI VRYRADYQVR PDAGNVQTET YEVLLKTKAS VEQFSQVRLS YSEKMETLEV LGAYTITADG QRRDVPADRI YTQESYSSAS AAMYADRKVR VIVFPNLAPG TRLYYQVRRT QATPYFPGYF GLWETFNVFT EYEDAEVTLS APANLPMFVD SRGVQGSDRP TVKNGQAQWR WRYQRREAMP AQNWSAAGWE FGPNIMASTY RDWSQMGRAY QLKAGPAAQV TPELQALADQ ITTGISDRRE QADALYRWVA QNIRYVAVYL GNGGLEPNSA QSVLDNHYGD CKDHVTILEA LLAAKGIASS PVLIGAGGGP TLPKIPVLGR FNHAITYIPE FDLYLDSTTA WARFGQLPEG DLGAPVMRTR DASLARTPAN TPQRNATSME VRFTFDANGN LRGETIPKLG ENAEIGMRAQ FSQLNAQNRA RAEEQIMAAS GFDGRGQLQI QGVPVDLTRP FGYRMAFQAE DYADFSVAGG MAVPDPPGGE SVRGLYATAS APANEAPFYC NASLREETYR LQFPANAPII AIPASQRFTN AAGEYRVDWS REGQDVIVHH RLQQNAVRGP EALCQPQDYP AFRALYREVR RGFRGQVLYG RLPAAAD
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