Gene Smal_1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1934 
Symbol 
ID6476041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2174948 
End bp2176891 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content67% 
IMG OID642731116 
Producthypothetical protein 
Protein accessionYP_002028321 
Protein GI194365711 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.279143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.581278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCACC CCGTACCAAG CGCGCTGGCA CTGGCGCTGG CAGCCTTCCT GGCTGCCGGC 
CCGGCACTGG CAGAAACCGC CACCTCCGCG CCCGCCACGG CGCCGCCTTC CACCAGCGGC
GATACCGAAG CCAGCAATAA TTTCAGCATT GTCCGTTACC GCGCCGACTA CCAGGTGCGG
CCCGATGCGG GCAATGTGCA GACCGAAACC TACGAAGTCC TGCTCAAGAC CAAGGCCTCC
GTCGAGCAGT TCAGCCAGGT GCGGCTGAGC TACAGCGAGA AGATGGAGAC GCTGGAAGTG
CTCGGCGCCT ACACCATCAC CGCCGATGGT CAGCGCCGCG ACGTCCCCGC CGACCGCATC
TACACCCAGG AGAGTTACTC CAGCGCCTCG GCGGCGATGT ATGCCGACCG CAAGGTGCGG
GTGATCGTGT TCCCGAACCT GGCCCCGGGC ACGCGCCTGT ACTACCAGGT GCGTCGCACC
CAGGCCACGC CGTACTTCCC GGGCTATTTC GGCCTGTGGG AGACCTTCAA CGTCTTCACC
GAGTACGAGG ACGCGGAGGT CACCCTGAGT GCGCCGGCCA ACCTGCCGAT GTTCGTCGAC
AGCCGTGGTG TGCAGGGCAG TGATCGCCCG ACGGTGAAGA ATGGCCAGGC GCAGTGGCGC
TGGCGCTACC AGCGGCGCGA GGCCATGCCA GCGCAGAACT GGTCAGCGGC AGGCTGGGAG
TTCGGCCCGA ATATCATGGC CAGCACCTAT CGTGACTGGT CGCAGATGGG CCGTGCCTAC
CAGCTCAAGG CTGGCCCGGC CGCGCAGGTC ACCCCGGAAC TACAGGCGCT GGCCGACCAG
ATCACCACCG GCATCAGCGA CCGCCGCGAG CAGGCCGACG CGCTGTACCG CTGGGTCGCG
CAGAACATCC GCTATGTGGC GGTGTACCTG GGCAATGGCG GCCTGGAGCC GAACAGCGCG
CAGAGCGTCC TCGACAACCA CTATGGTGAC TGCAAGGACC ATGTGACGAT CCTGGAGGCG
CTGCTGGCGG CCAAGGGTAT CGCCAGTTCG CCGGTGCTGA TCGGTGCCGG CGGTGGCCCG
ACCCTGCCGA AGATCCCGGT ACTGGGCCGC TTCAATCACG CCATCACCTA CATCCCCGAG
TTCGACCTGT ACCTGGATTC GACCACCGCC TGGGCGCGCT TCGGGCAGTT GCCGGAAGGT
GACCTGGGCG CACCGGTGAT GCGCACCCGC GATGCGAGCC TGGCGCGCAC CCCGGCCAAC
ACGCCGCAGC GCAATGCCAC TTCGATGGAA GTGCGCTTCA CCTTCGACGC CAATGGCAAC
CTGCGCGGCG AGACCATTCC GAAGCTGGGC GAGAACGCCG AAATCGGCAT GCGTGCCCAG
TTCTCCCAGC TCAACGCGCA GAACCGCGCG CGCGCCGAGG AGCAGATCAT GGCCGCGTCC
GGTTTCGACG GGCGAGGGCA GCTACAGATC CAAGGCGTGC CGGTCGACCT GACCCGGCCG
TTCGGCTACC GCATGGCCTT CCAGGCTGAG GACTACGCCG ACTTCAGCGT GGCCGGCGGC
ATGGCCGTGC CGGACCCGCC GGGTGGTGAA TCGGTGCGCG GCCTGTACGC CACCGCCTCG
GCACCGGCCA ATGAGGCGCC GTTCTACTGC AATGCCAGCC TGCGCGAGGA AACCTATCGC
CTGCAGTTCC CGGCCAATGC GCCGATCATC GCCATCCCGG CCAGCCAGCG CTTCACCAAC
GCCGCCGGTG AGTACCGGGT GGACTGGAGC CGCGAAGGCC AGGACGTGAT CGTGCACCAC
CGCCTGCAGC AGAATGCGGT GCGTGGCCCG GAGGCGTTGT GCCAACCGCA GGACTACCCG
GCGTTCCGCG CGCTGTATCG AGAAGTGCGG CGTGGCTTCC GTGGCCAGGT GCTGTACGGC
AGGCTGCCGG CCGCTGCCGA CTGA
 
Protein sequence
MLHPVPSALA LALAAFLAAG PALAETATSA PATAPPSTSG DTEASNNFSI VRYRADYQVR 
PDAGNVQTET YEVLLKTKAS VEQFSQVRLS YSEKMETLEV LGAYTITADG QRRDVPADRI
YTQESYSSAS AAMYADRKVR VIVFPNLAPG TRLYYQVRRT QATPYFPGYF GLWETFNVFT
EYEDAEVTLS APANLPMFVD SRGVQGSDRP TVKNGQAQWR WRYQRREAMP AQNWSAAGWE
FGPNIMASTY RDWSQMGRAY QLKAGPAAQV TPELQALADQ ITTGISDRRE QADALYRWVA
QNIRYVAVYL GNGGLEPNSA QSVLDNHYGD CKDHVTILEA LLAAKGIASS PVLIGAGGGP
TLPKIPVLGR FNHAITYIPE FDLYLDSTTA WARFGQLPEG DLGAPVMRTR DASLARTPAN
TPQRNATSME VRFTFDANGN LRGETIPKLG ENAEIGMRAQ FSQLNAQNRA RAEEQIMAAS
GFDGRGQLQI QGVPVDLTRP FGYRMAFQAE DYADFSVAGG MAVPDPPGGE SVRGLYATAS
APANEAPFYC NASLREETYR LQFPANAPII AIPASQRFTN AAGEYRVDWS REGQDVIVHH
RLQQNAVRGP EALCQPQDYP AFRALYREVR RGFRGQVLYG RLPAAAD