Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1819 |
Symbol | |
ID | 6475772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 2041281 |
End bp | 2044172 |
Gene Length | 2892 bp |
Protein Length | 963 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642731001 |
Product | Vault protein inter-alpha-trypsin domain protein |
Protein accession | YP_002028206 |
Protein GI | 194365596 |
COG category | [S] Function unknown |
COG ID | [COG4676] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.541917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.345133 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTTCG TCCGTTGCTG CGCTGTGTTG TTGCTGGCCC TCGCGGTTGG GCCTGTCGGC GCTCAGTCGC CACGTATTGC CAGGCCGCAA GCCACCACCC CGCTGTTGAT TGCGCCCGCC GCCGAACAGT CGGTGCAGCT GCAGCGTGCC CGCATCGAAG GCGAGGTCCA GGCCGGCGTC GCCCAGACCC GGATCACCCT GGAGTTCCAC AACCCGAACC GGCGCGTGCT GGAGGGCGAG CTGCAGTTCC CGTTGGCCGA TGGCCAGCAG ATCACCGGCT TTGCACTGGA CATCAACGGT GAGCTGCGCG ATGCGGTGCC GGTGCCCAAG GACCGTGGCC GCCAGGTGTT CGAGGAGATC GCCCGCCGCG GTGTCGACCC GGGCCTGCTG GAACAGACTG CCGGCAACCA GTTCCGCCTG CGTATCTATC CGCTGCCGGC CGGTGGCAGC CGACGCGTGC AGCTGGTGAT TCGCGAACCG CTGGCCTTCG CCGGCCAGGG CTGGCAGTGG ACGCTGCCGC TGCAGTTCGC CGCTGGCGCT GCATCGGTTG AGCTGAAGCT GCAGGCGCCG GAAGCGGCCA CCGCAGGTAC GGCTCCGTTC CGCATCAACG CGGGCCAGCT GCACTGGCAG GGCAGGGGCG CGCAGTTGCC GACGCAGCTG CAGTGGAGCC TGCCGGCGGC ACGCCAGGCA CAGGTGCAGG TGGCGCCCTG GCAGGACGGG CACTACCTGT TGGCGCAGCT GCCGGTGTCG CCCAGCAGCA CGCCCCGCAC GTTGCCCAGC GATATCGGCC TGCTGTGGGA CGGTTCCGGT TCGGCGGGCC AGCGCGATCG CACACGTGAG TTCGCCTTGC TGGATCGCTA TTTCGCAGCG ATGGGTGACG GCACCGTGGC GTTGACCGTG CTGCGCGACC GTGCCGAACC GATGCGTCGC TTCCGTGTCC GTGCAGGCAA CTGGAGCGAG CTGCGCGCAG CGCTGCAGGC CGTACGCCCG GACGGTGCCA GCGCGCTGGC GCAGTGGCAG CCGCAACCGA GCGTGAAGGA GTACCTGCTG GTCAGCGATG GCCTGCTGAC CTATGGACCG GAAGCACTGC CAGCACTCGC ACCGCAGCAG CGCCTGTTCG CGGTCAGCAG TGCTGGTGCG CGAACCGATG CAGTGCGCCT GCGCGGCTGG AGCGAAGCGC ATGGCGGTCG CTTTGTCGCG CTGGGCAAGG ATGTTGATGC GGCCGCTCGC GAACTGCTGT CGTCGCCGTT GGACGTGCAG GTCGATGCGG GCCGTGGCGT ACAGGATGTT GTGATCGATC GTCGCAGCGA GGCCGAAGGC TGGCTATGGC TGCATGCCCT CCTTGCGGCG GACGGCGTGC CGATGCGGGT GCGCGTGGGC GGCGGTGAAT GGCAGGCGCT GCCGGCAACG CAGAAGAGTG ACGACGGTGA GCTGCTGGCC GGCTTGTGGG CGCAGGCCCG TCTGCAGCAA CTCGGCGCCG ACCGCCGAGG CAATCGCGAG GCAATGCAAC TGCTGTCGCA GCAGTTCGGC GTGGTCGGAC CGGACACCTC GCTGATCGTG CTGGAGACCC TGGAGGACTA CCTGCGCTAC GCGATCCGCC CGTCCGGCAA GCTGCGCGCC GAGTACGATG CCCGCTTCGC ACGGCAGGTG AGCGATCGCG CCGCTGCCGA TCGCCAGCGC CTGGACCAGG TTGCCGCACG TTGGAAGGAG CGCCAGCAGT GGTGGAACCG AAGCTGGCCG AAGGGAGCGC CTCCGCAGTT GAAGGGCGGG GCGCTGGAAG TTGCATCCGC GGACTACGCG ATGGACTCGG CGCCGGTGGC GATGCTCGCT GCGCCGGCCC CCGCGGCACC GATGGCCGCC GCCGAGCAAC GCATGGAAGC CAGCAGCGCG CGTGCACGTC GCTCAGCCTC CGCATCGAAC AAAGCGCTGG ATGTGGTCGC GCTCACCGGC AGCGTTGTCG CTGCATCCGC CGCCAACAAT GGGGAGCTCG GCATCCAGCT GGCGGCGTGG CAGCCGGACT CGGCCATCGC CCGGCGGCTG CGCCAGGGCC CGGCGTCGCA ACTGTATGAC CGTTACCTGG CCGAGCGTGA CGCACACGCC GACAGCAGCG CGTTCTTCCT CGACGTGGCC GATCTGTTGC TGGAGCAGGG CCAGCGCGAA CTGGCACTGC GCGTGCTGTC GAACCTGGCC GAGATGGACC TGGACAACCG CCACCTGTTG CGTGTGCTCG GCTACCGGTT GATGCAGGCC GACGCGCCGG CACTGGCGGT TCCGGTGTTC GAGCAGGTGC TGGCGATGGG CCAGGAAGAA CCGCAGAGCT TCCGCGATCT TGGCCTGGCA CTGGCGGCTG CGGGCAAGCC GCAGCAGGCG TTGGCGCCGC TGTATCAGGT GGTGGTGCGG CCGTGGGACA ACCGCTTCGA CGGCATCGCC CTGATCGCGC TGGATGAGCT GAACAACTTG GTGGCACGCA GCACGCCACG GCTGGATACC CGCAGCATCG ACCCGCGCCT GCTGCAGGCG ATGCCGCTGG ACCTGCGCGT GGTGCTGTCG TGGGATGCCG ACAACAGCGA CATGGACCTG TGGGTGACCG ACCCGAACGG CGAGCGCGCG TACTACGGCA ACCGCCTGAC CTATCAGGGC GGGCAGATGT CGCAGGACTT CACCGGCGGC TATGGTCCCG AGCAGTTCTC GCTGCGCAAC GCCAAGCCCG GCAAGTACAA GGTGGAGGCG AACTACTTCG GCAGCCGCCA GCAGCTGGTG ACCGGTGCGA CGACGCTGAT GCTGCGGCTG ACCACGCACT GGGGCACGCC GAAGCAGAAG GACCAGATGG TGACGATGCG ATTGAAGGAT CGCGCTGAAA CCGTGCTGGT GGGCGAGTTC GAGGTGAAAT GA
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Protein sequence | MVFVRCCAVL LLALAVGPVG AQSPRIARPQ ATTPLLIAPA AEQSVQLQRA RIEGEVQAGV AQTRITLEFH NPNRRVLEGE LQFPLADGQQ ITGFALDING ELRDAVPVPK DRGRQVFEEI ARRGVDPGLL EQTAGNQFRL RIYPLPAGGS RRVQLVIREP LAFAGQGWQW TLPLQFAAGA ASVELKLQAP EAATAGTAPF RINAGQLHWQ GRGAQLPTQL QWSLPAARQA QVQVAPWQDG HYLLAQLPVS PSSTPRTLPS DIGLLWDGSG SAGQRDRTRE FALLDRYFAA MGDGTVALTV LRDRAEPMRR FRVRAGNWSE LRAALQAVRP DGASALAQWQ PQPSVKEYLL VSDGLLTYGP EALPALAPQQ RLFAVSSAGA RTDAVRLRGW SEAHGGRFVA LGKDVDAAAR ELLSSPLDVQ VDAGRGVQDV VIDRRSEAEG WLWLHALLAA DGVPMRVRVG GGEWQALPAT QKSDDGELLA GLWAQARLQQ LGADRRGNRE AMQLLSQQFG VVGPDTSLIV LETLEDYLRY AIRPSGKLRA EYDARFARQV SDRAAADRQR LDQVAARWKE RQQWWNRSWP KGAPPQLKGG ALEVASADYA MDSAPVAMLA APAPAAPMAA AEQRMEASSA RARRSASASN KALDVVALTG SVVAASAANN GELGIQLAAW QPDSAIARRL RQGPASQLYD RYLAERDAHA DSSAFFLDVA DLLLEQGQRE LALRVLSNLA EMDLDNRHLL RVLGYRLMQA DAPALAVPVF EQVLAMGQEE PQSFRDLGLA LAAAGKPQQA LAPLYQVVVR PWDNRFDGIA LIALDELNNL VARSTPRLDT RSIDPRLLQA MPLDLRVVLS WDADNSDMDL WVTDPNGERA YYGNRLTYQG GQMSQDFTGG YGPEQFSLRN AKPGKYKVEA NYFGSRQQLV TGATTLMLRL TTHWGTPKQK DQMVTMRLKD RAETVLVGEF EVK
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