Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1639 |
Symbol | |
ID | 6475509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 1848518 |
End bp | 1849750 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642730821 |
Product | TraB family protein |
Protein accession | YP_002028027 |
Protein GI | 194365417 |
COG category | [S] Function unknown |
COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.840587 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.624161 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAAT CCATGACTGA AACCCTTCCT GACACCGGCG ACGACCTGTT CGCCGGCCAG CCGGTACGCA TCGTTGAACG CGACGGCGTG CGCTACACCC TGCTCGGCAC CGCGCACGTT TCCCGCGCCA GCGTCGAAGC GGTGGAAAAA GCGATCGACA GTGGCCGCTT CGACGCGGTG GCCGTCGAGC TCGATCCGCA GCGCCTGCAG GCCCTGAGCG ACCCGGACAC GCTGGCCAAG CTCGACCTGG TCGAGGTGAT CCGCAAGGGC CGCGTCGCCC TGTTCGCCGC CAACCTGGCG CTGTCCGCCT ACCAGCGGCG CCTGGCAGAA CAGCTCGACA TCGAGCCGGG TGCCGAACTC AAACGCGCGG TGGAGCTGGC CCGCGAGCGC GATCTGCCGG TGCACCTGAT CGACCGTGAA GTCGGCCTGA CCTTCCGCCG TGCATCGCAG CGGCTGGGCT TCTTCGGCAA GCTGAAGCTG GTCGCTGGGC TTGGCGCCGG CCTGTTCTCG TCGGAGGAAG TGGGCGAGAA CGAGATCGAG AAGCTCAAGC AGGGCGACAT GCTGGAGTCG AGCTTCGGCG AGTTCGCCAG CGAGAGCCCG GCGCTGTACG AGACCATCAT CGGCGAGCGC GACCGCTACA TGGCCACGCG CCTGCGCGAA GCGCACGACC CGCAGCAGCG CGAAGTGCTG GCGGTGGTCG GTGCCGGTCA CCTGGCCGGG CTGGCACGCT ATCTGGAAAC CGACACCGAG GCACCGGCAC CGCTGCGCGC CGAGCTGGAA TCGGTGCCGA AGAAGCGCAA CATCCCGTGG TTCACGCTGG GCATCCTGGC CATCGTAGCG ACCGGCATCG GCGTGGGCTT CTATCGCGGC GGGCTGGGTG TGGGCACCGA GCTGCTGGCA ACCTGGGCGA TGTACACCGG CGGCCTGGCC GGCCTGGGCT GCCTGCTGGC CGGTGGCCAT CCGCTGAGCA TCCTGACCGC GATTGCGGTA GCGCCGTTCA AACCGTTCCG CTTGAGCATT CCAACCGGCG CGTTCTCGGC GCTGGTGGAA GCACGCCTGC GCAAGCCGGC GTACGAGGAC TTCCTGAAAC TGCGCGACGA TGCGCAGAGC CTGAAGGGCT GGTACCGCAA CCGCGTCACC CGCGTGGTGC TGACCTTCAT GTTGACCAAC CTGGGCAGCA TGCTCGGCCT GTGGCTGACC ACGTTCAAGG TGTGGGGCAA GGTGGCGGGC TGA
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Protein sequence | MNESMTETLP DTGDDLFAGQ PVRIVERDGV RYTLLGTAHV SRASVEAVEK AIDSGRFDAV AVELDPQRLQ ALSDPDTLAK LDLVEVIRKG RVALFAANLA LSAYQRRLAE QLDIEPGAEL KRAVELARER DLPVHLIDRE VGLTFRRASQ RLGFFGKLKL VAGLGAGLFS SEEVGENEIE KLKQGDMLES SFGEFASESP ALYETIIGER DRYMATRLRE AHDPQQREVL AVVGAGHLAG LARYLETDTE APAPLRAELE SVPKKRNIPW FTLGILAIVA TGIGVGFYRG GLGVGTELLA TWAMYTGGLA GLGCLLAGGH PLSILTAIAV APFKPFRLSI PTGAFSALVE ARLRKPAYED FLKLRDDAQS LKGWYRNRVT RVVLTFMLTN LGSMLGLWLT TFKVWGKVAG
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