Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1213 |
Symbol | |
ID | 6475065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 1379095 |
End bp | 1379661 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642730378 |
Product | regulatory protein TetR |
Protein accession | YP_002027601 |
Protein GI | 194364991 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.02381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCCC AACGTGCCGA TGCTGCTGCC CGCCGCGCCC TTATCCTCGA CGCCGCCGAT CATGTGTTCG GCCAACACGG TGTCACCGCC CCGCTGGACC TGGTGGTCGA ACGCGCCCAG GTGGGCCGCG CCACCCTGTA CCGCAACTTC CCCGACCGCA CCGCGCTGAT CCAGGCACTG CTGCAACGTA CGGTCGATCG CATCCGGCGC CAGGTCGAGC AGCTCGGCGA CCGCGACGAT GCCCTGTTCG AAGTGTTCGA GGGTATGGCC CAGCGCATCA TCGATTCGCC GGCACTGGCC GATTACTGGC GTGCAGTCGA TTCGGACGTG CCGGCCATGC GCACCGCGCG CGAGACCGTG CGCGATCTGC TGGAAGCACC GATCGCCCGT GCCAAGGCCG CCGGACTGTG CCGTGCCGAC CTGGAGAAGA CGGACATTTC ACTGATCTCG GGCATGCTGG GCGCAGCCCT GCGCGGCAAA ACCCGCGACG AGCGCGCCCA CCTTGCCGGG CGTGCCCTGC AGCTGCTGCG CGGGGGTCTC CAGGGAGCAA CCAGCGAGGC CCGCTGA
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Protein sequence | MTAQRADAAA RRALILDAAD HVFGQHGVTA PLDLVVERAQ VGRATLYRNF PDRTALIQAL LQRTVDRIRR QVEQLGDRDD ALFEVFEGMA QRIIDSPALA DYWRAVDSDV PAMRTARETV RDLLEAPIAR AKAAGLCRAD LEKTDISLIS GMLGAALRGK TRDERAHLAG RALQLLRGGL QGATSEAR
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