Gene Smal_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1213 
Symbol 
ID6475065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1379095 
End bp1379661 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content69% 
IMG OID642730378 
Productregulatory protein TetR 
Protein accessionYP_002027601 
Protein GI194364991 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.02381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCC AACGTGCCGA TGCTGCTGCC CGCCGCGCCC TTATCCTCGA CGCCGCCGAT 
CATGTGTTCG GCCAACACGG TGTCACCGCC CCGCTGGACC TGGTGGTCGA ACGCGCCCAG
GTGGGCCGCG CCACCCTGTA CCGCAACTTC CCCGACCGCA CCGCGCTGAT CCAGGCACTG
CTGCAACGTA CGGTCGATCG CATCCGGCGC CAGGTCGAGC AGCTCGGCGA CCGCGACGAT
GCCCTGTTCG AAGTGTTCGA GGGTATGGCC CAGCGCATCA TCGATTCGCC GGCACTGGCC
GATTACTGGC GTGCAGTCGA TTCGGACGTG CCGGCCATGC GCACCGCGCG CGAGACCGTG
CGCGATCTGC TGGAAGCACC GATCGCCCGT GCCAAGGCCG CCGGACTGTG CCGTGCCGAC
CTGGAGAAGA CGGACATTTC ACTGATCTCG GGCATGCTGG GCGCAGCCCT GCGCGGCAAA
ACCCGCGACG AGCGCGCCCA CCTTGCCGGG CGTGCCCTGC AGCTGCTGCG CGGGGGTCTC
CAGGGAGCAA CCAGCGAGGC CCGCTGA
 
Protein sequence
MTAQRADAAA RRALILDAAD HVFGQHGVTA PLDLVVERAQ VGRATLYRNF PDRTALIQAL 
LQRTVDRIRR QVEQLGDRDD ALFEVFEGMA QRIIDSPALA DYWRAVDSDV PAMRTARETV
RDLLEAPIAR AKAAGLCRAD LEKTDISLIS GMLGAALRGK TRDERAHLAG RALQLLRGGL
QGATSEAR