Gene Smal_1133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1133 
Symbol 
ID6474984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1290349 
End bp1291317 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content67% 
IMG OID642730297 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_002027521 
Protein GI194364911 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC TCCGGCACAA GGAAGATGCC TCGCTGTACG AACGTGCCAG CGACTGGGTG 
GCACGCCTGG AAGCCCCGGA TTGCACCGCG GCCGAGCGCG AGTCATTCGA AGACTGGTTG
GCTGAAGATC CTGCCCATGT CAAAGCCTGG GTACAGGCCG AGACGCTGTT CCAGCAGGGC
GAGACGCTGG GCTCCGACCC GTGGCTGCGC ACTGCGGCCG CGCGCGTGGC GCGGCCTGCA
CGCCGCCGCC TGTTGCCCGG CCTGGCCGCA GCCGCCGGCA TCTGTCTGGC GATCGGCATC
GGCTGGATGA TTGCGCTGGA TGGCAATCCG ACACCGCAGC TGTATGCCAA TGACACCCGT
CTGCCGCGCC AGTTGACCCT GGCCGACGGC AGCCTGGCCA CCCTCGACGC CGGCACCACG
CTGCGCGCGC GCTTCGGCTG GCGTCATCGC GATCTGGAAC TGGAACGCGG ACGTCTGCAA
CTGCAGGTCG CGCCGTCGAG CAAGGCGCTG CAGCTGCGTG CCGGCGACAG CACCATCCGC
GACATCGGCA CCACCTTCCA GGTCGAGCGC CTGCGCGATG GACTGGTTGA AGTGGCATTG
CTGGAAGGTG CGGTTGAAGT CAGCAACGGC ACGGCCCAGC ACATGCTGGC GCCCGGCCAG
CAGCTGCAGG TATTGCCCTC CGGCCGCATC CAGCCTGGCC CGGCGTTGTC CTCCACCGTG
GCGGCCGAAG GTTGGCTGCG CGGAAAACTG GTGTTCGATG CCACACCGTT GTCGATCGTG
GTCGAACGCA TGAACCGCTA TGGCCGGACG CCACTGGTGA TTGTCGACCC GGAGATCACC
GATCTGGCGG TAAGTGGAAC GTTCCGCGCA GGCGACGCAC AGGAGTTGCT GTCCGCGCTG
GAACTGGGAT GGTCCGTCGC TGGCCAGACG CGCCCGGATG GCGCGCTGGA ACTGCGTCGC
ACCTACTGA
 
Protein sequence
MSRLRHKEDA SLYERASDWV ARLEAPDCTA AERESFEDWL AEDPAHVKAW VQAETLFQQG 
ETLGSDPWLR TAAARVARPA RRRLLPGLAA AAGICLAIGI GWMIALDGNP TPQLYANDTR
LPRQLTLADG SLATLDAGTT LRARFGWRHR DLELERGRLQ LQVAPSSKAL QLRAGDSTIR
DIGTTFQVER LRDGLVEVAL LEGAVEVSNG TAQHMLAPGQ QLQVLPSGRI QPGPALSSTV
AAEGWLRGKL VFDATPLSIV VERMNRYGRT PLVIVDPEIT DLAVSGTFRA GDAQELLSAL
ELGWSVAGQT RPDGALELRR TY