Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0400 |
Symbol | |
ID | 6478270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 475966 |
End bp | 477573 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642729545 |
Product | ABC transporter related |
Protein accession | YP_002026788 |
Protein GI | 194364178 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.132459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.738425 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCGC ATTCCCTCAC GCTCGATCGC GTGTCGTATC GATTGGCCGA CGGCCGAGTG CTGTTTTCCG ATCTGTCGTT TTCCTTCGAA CCGGTCGCCA CCGGCCTGGT CGGTGCCAAT GGCACCGGCA AAAGCGTGCT CGCACGCCTG CTGGCCGGGC GGCTGTCGCC CGACAGTGGC CAGGTGCGTG GCAGTGACCG CGTGTTCCTG TTGCCCACAC CGGGCTATCC ACCAGCCGGC ACCGTGGGCG AGTTGGCCGG TGTGGGTGAA GCGCTGTCCG CGCTGGCACG CATCGAAGCC GGCAGCGTCG ATGAGGCCGA CTTCACCTGC GTAGGCGAGC GCTGGGACCT GCGCGAACGC CTGCAGCAGC AATGGCAGGC GCTAGGACTG CCCGACGATC TCGATCACGC CCAGCCTGCC GCACGCCTCA GTGGCGGCCA GGCGATGCAG GTGGCGCTGT CCGGCGCGTG GGCCAGCGGC GCCGACTGGT TGATCCTGGA CGAACCCAGC AATCACCTTG ATGCGCGTCA TCGCCAGCAG CTGTACAAGC AGTTGCAGCA ATGGCGCGGC GGCCTGCTGG CAATCAGCCA TGATCGCGAA CTGCTGGGCC GCATGCAGCA GATTGTCGAA CTTGATGCGC GTGGCCTGCA TCGCTATGGC GGCGCGTGGC AGCACTATGC CGAAGTGCGC GCCGCCGAAC GCGAAGCCGC CGCCGCCCAG CTCGACCATG CGCGCGCCCA GCACCGACAG CAGCAACGCA GCGCGCGCGA GCAGAACGAA CGCCAGCAGC AACGTCAGGC ACGTGGCAAT CGCGAAGCAA AGCAGGCCAA CCAGGCACCG ATCCTGCTCG GCCGCCAGAA GCAGCGTGCC GAAGCCAGCC TTGGTCGCGC GCAGCAGGTG CAGTCAGAAC GCCTGCAGGC CAGTGCAGAG CAGCTGCGTG CAGCGATATC CGCGGTTCAC ACCGCGCCGG AACTGGCGCT GTTTGCCGGT GCGGGGGAAC GTGGCAGCAC GCGCCTGCTG CAGGCCGAGG CCTTGGTGCT GCCGCATGGC TGCAGTGCCC CGTTGCAGCT GGAGATCCGT CGCGGCCAGC GCATCGCCGT GGTCGGTGAC AACGGCAGTG GCAAATCCAC CCTGCTGCGT GTGCTGGCCG GCCAGCTGCG AGCGCGCGAT GGCACTGTGC AACGCCACGC GCCACTGGCG CTGCTTGACC AGCAACTGCT GGGATTGTCC GGCGAGCACA GCATCCTCGA TAGCGTACAG GCCGCCAATC CGGGGGCGGA CCCGGGCGAA CTGCGCACTC GGCTCGCACT ACTGGGTCTG GACGCACAGC GCATCCAGCG CCCCGCCAGC AGCCTCAGCG ATGGCGAACG GGTGAAGGGG GCGTTGGCAA GCGTGCTCTA CGCCGATCCC GCGCCGCAGC TGTTGCTGCT GGACGAGCCC GGCAATGCAC TGGACCTAAG CGCATTGCAG GCACTGGAGG AACTGCTGGC GGCATGGCCG GGTGCCTTGA TGATGGTCAG CCACGACCTG CATCTGCTGC AGGCATTGCG GCCGACGCAG GTATTGCAGG TCACCGCCAA CAGCTGGCAA TGGCGCGACA GTCTGTAG
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Protein sequence | MTPHSLTLDR VSYRLADGRV LFSDLSFSFE PVATGLVGAN GTGKSVLARL LAGRLSPDSG QVRGSDRVFL LPTPGYPPAG TVGELAGVGE ALSALARIEA GSVDEADFTC VGERWDLRER LQQQWQALGL PDDLDHAQPA ARLSGGQAMQ VALSGAWASG ADWLILDEPS NHLDARHRQQ LYKQLQQWRG GLLAISHDRE LLGRMQQIVE LDARGLHRYG GAWQHYAEVR AAEREAAAAQ LDHARAQHRQ QQRSAREQNE RQQQRQARGN REAKQANQAP ILLGRQKQRA EASLGRAQQV QSERLQASAE QLRAAISAVH TAPELALFAG AGERGSTRLL QAEALVLPHG CSAPLQLEIR RGQRIAVVGD NGSGKSTLLR VLAGQLRARD GTVQRHAPLA LLDQQLLGLS GEHSILDSVQ AANPGADPGE LRTRLALLGL DAQRIQRPAS SLSDGERVKG ALASVLYADP APQLLLLDEP GNALDLSALQ ALEELLAAWP GALMMVSHDL HLLQALRPTQ VLQVTANSWQ WRDSL
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