| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_7051 |
|---|
| Symbol | |
|---|
| ID | 8716338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013737 |
|---|
| Strand | + |
|---|
| Start bp | 401 |
|---|
| End bp | 1363 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | initiator RepB protein |
|---|
| Protein accession | YP_003391793 |
|---|
| Protein GI | 284005993 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAG TTAAACCAAC CATGGTTCTT TTTGAGAACT CGCTCAATCG TATCGCTGTC
AATCTCTCCA AGCTACAGCG AAACTTATTC TACATGGTCT GCTCTCAAAT CCAGCCTGAC
CACACCGCAG AAACCATTTA TGAGATTTCA GCTATCGAGT TGATGGAACG TACAGGCGAC
AAGATTAACT ATGCTAGGTT GCGCCAACAG ACTTTACAGC TCATCCATCC CAAGGAATTT
GAAATGCCTT CTAATCGAGT CGATAAGGAA GGCAAACCAC GTAAGAACGT CTTACAGACG
GGCTTATTCG CGTCGGCTCT ATATTTGGAG GGAGAAGGCA CAGTGCAGCT CACAATCTCA
GCGCACGTAA GGCCGTTTAT TCTCAATTTC AGTGAAAAAC TCAAAGGAGG TAACTTCTCT
CAACTTGATG TCGATCTGGT GCTGGCCCTG CGTTCTAAAT ATGGTCAAGC AATGTATCAA
CAATTAACAC AGTGGCGTTT CCATGCTGAT AAAGGCCATA TGTACCCCTT AGACGAACTT
AAAACGTTGC TTGGCGTGAT GAACAAGGAT GGCTTTGATA AGTACAGCAA ATGGGGCGAA
TTCGATGCTA AAGTGTTAAA ACCGGCCAAG AGAGACCTCG AAAAAACAGA CCTGCAATTT
ACCTATGAAC CAATGCCTGC TCCTAGGCGT GGACGTGGCC ACAAGGTAAC TCATGTAAAG
TTTATGCTCT CCGTGGATGA CGACCGTAAT TTCCCCCCTG GCTTTGTGAT TAGTGAAGAG
CATACAACCT TATTCGACCG GCTCGTCAAG CAGTTTGGAC TACGGAAAGA TCAGGCTCAA
ACCGTGCTGT TAAATTTCCC CATCAAGGAA ATCAATAAAC GGCTTTATGA CCTTCATATA
CAACATAATG ACAAGAAAAT CAGCAATTTA GGCGCGTACA CGGCTAAATC GTTCGGTGTT
TAG
|
|---|
| Protein sequence | MDKVKPTMVL FENSLNRIAV NLSKLQRNLF YMVCSQIQPD HTAETIYEIS AIELMERTGD
KINYARLRQQ TLQLIHPKEF EMPSNRVDKE GKPRKNVLQT GLFASALYLE GEGTVQLTIS
AHVRPFILNF SEKLKGGNFS QLDVDLVLAL RSKYGQAMYQ QLTQWRFHAD KGHMYPLDEL
KTLLGVMNKD GFDKYSKWGE FDAKVLKPAK RDLEKTDLQF TYEPMPAPRR GRGHKVTHVK
FMLSVDDDRN FPPGFVISEE HTTLFDRLVK QFGLRKDQAQ TVLLNFPIKE INKRLYDLHI
QHNDKKISNL GAYTAKSFGV
|
|---|
| |