| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6932 |
|---|
| Symbol | |
|---|
| ID | 8716196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013732 |
|---|
| Strand | + |
|---|
| Start bp | 106410 |
|---|
| End bp | 107822 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_003391676 |
|---|
| Protein GI | 284005857 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTG AGCAGATTTA TACCGGTTGC TTATCGCAGG GAACCTACTA TATCGAAAGC
AACGGGGAAG CCGCTGTCAT TGATCCCTTA CGGGAGGTGG CTTCGTATTT GGAGAAAGCT
CATAGCGATG GGGCGACGAT TAAGTATGTA TTTGAGACGC ACCTGCACGC TGATTTTGTG
TCGGGTCATC TTGACTTAGC CCGCCAGGCA GGCGCACCAA TCATCTATGG CCCCAACGCA
CAGACTGGCT TTGAATCCTA TAGTGCCCGC GCCGGAGAAG AGTTTCCACT GGGTGCGCTA
ACAATTCAAG TACTGCATAC ACCGGGTCAT ACGATTGAAT CGAGCTGTTA TCTGCTCCTG
GATGCGGACC GGCTGCCCAT CGCGCTTTTT AGTGGCGATA CCTTGTTTAT TGGCGATGTT
GGGCGACCCG ACCTGGCGCA GGGATCCGCA TTGACCACGC TGGATTTAGC GGGCATGCTC
TTCGATTCGC TTAGAACCCA GATTATGCCC TTACCGGACA ACGTAGTGAT TTATCCGGCT
CACGGAGCGG GCTCCGCTTG TGGCAAGAGC ATGAGTAAAG AAACCAGCGA TACGCTGGGC
AATCAGAAAC GGGTCAATTA TGCGCTCCGA GCCGACATGA GCCGGCTGGA ATTTATTCAG
GAAGTAACCG ACGGACTAGC CAAACCGCCC CCTTATTTTC CTGAAAACGT CCGCATGAAC
CGGGAAGGCT ATGAACAGAT TGACCGCGTG TTGAAACGGG GCGCGCAGCC ACTTAGCCCA
CAGGCCTTTG AAGCGGCCGC CAACCAGACG GGTGCGCTCC TGCTGGATAC CCGCGACGCG
CAACTCTTCG CTACCGGGTT TGTGCCCAAC GCCATTAATA TTGGCCTGAA TGGGCAGTTT
GCTCCCTGGG TAGGCGCACT CATCCCAGAC GTGAGACAGC CAATTTTGCT CATTACAGAA
GCGGGCAAAG CGGCTGAATC GCTGGTTCGA TTGGCCCGGG TGGGTTACGA TCAGGTTATT
GGCTACCTGG ATGGCGGACT AAACGCCTGG ATCAATGCCG GTCATGAGGT TGACTATATT
CCGTCTCTTT CAGCCGATGA AGTGGCCACT CGGTTAGCGC TGGATGAGCT TACCCTCGTG
GATGTACGTA AGCCGGGCGA GTTTGCCGCT GAGCACATCG ATGGGGCGAT TAATCTACCC
CTTGATACGT TGAATGACAG GATGGCGGAA ATACCAAAAG AAGGGTCGGT CTATGTGCAC
TGCGCAGGCG GATACCGCTC CATGATGGCC CTGTCGATTC TGAAGGCCCG TGGCTTCGAT
AACCTGATCG ACATTGCCGG TGGGTTTGCC GCTATGCAGC AAACCGGGCG TTTCAACACG
ACTAATTTCG TTTGTCCCGC TACCCAGCAG TAA
|
|---|
| Protein sequence | MKIEQIYTGC LSQGTYYIES NGEAAVIDPL REVASYLEKA HSDGATIKYV FETHLHADFV
SGHLDLARQA GAPIIYGPNA QTGFESYSAR AGEEFPLGAL TIQVLHTPGH TIESSCYLLL
DADRLPIALF SGDTLFIGDV GRPDLAQGSA LTTLDLAGML FDSLRTQIMP LPDNVVIYPA
HGAGSACGKS MSKETSDTLG NQKRVNYALR ADMSRLEFIQ EVTDGLAKPP PYFPENVRMN
REGYEQIDRV LKRGAQPLSP QAFEAAANQT GALLLDTRDA QLFATGFVPN AINIGLNGQF
APWVGALIPD VRQPILLITE AGKAAESLVR LARVGYDQVI GYLDGGLNAW INAGHEVDYI
PSLSADEVAT RLALDELTLV DVRKPGEFAA EHIDGAINLP LDTLNDRMAE IPKEGSVYVH
CAGGYRSMMA LSILKARGFD NLIDIAGGFA AMQQTGRFNT TNFVCPATQQ
|
|---|
| |