| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6879 |
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| Symbol | |
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| ID | 8716146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013732 |
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| Strand | + |
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| Start bp | 46291 |
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| End bp | 48114 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003391626 |
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| Protein GI | 284005807 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.537519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAC GATGGATATA TGGCTGGGCA GCCCTGCTGG TGCTGCTCAA TACCGCCTGC
CAGTCGGGTG GAAAGGCCAC AACAAAAAAT GATGATTCGA CCCGCATAGC CGCCAGCGAC
GAGCATGGCG GCCATAATCA CGGGCCAGAC GGGGCGGAAA AAATTACGTA CACCTGCCCC
ATGCACCCGC AAATTGTCCA GGACAAGCCC GGCTCCTGCC CCATCTGCGG CATGGATTTG
GTGCCGGTGG CGAAGACCGG CGAAAAAGCC ACAGAGATTA TGCTTAGCGA AAGCCAAATG
CAGCTTGCCA ACGTGATGGT TCAGCCGGTA GCGTCGGGCA ATATTGGTAA TAGTACCATT
CTGAACGCCC GGCTTGCCGC CGATGAGCAA CAAACGGATG TCATCAGCAG CCGGGTAGCG
GGCCGTATTG AGCGGCTCTA TGTGAAAGAG ACGGGTCAGC CCATCCGCAA AGGGCAGGTA
CTGTATGAGA TTTACAGCGA ACCCCTGCTT ACTCAGCAGC AGGAATACCT GTTAGCCCTC
CGGCAGGTCG AAGAACTGAA CGAACCACGC TATGAAGACT TTCGCCGGGC TTCTGAACAG
AAACTTAAAC TGTATGGCAT GACCGCTGAA CAGATTGCCG GGTTAGCCAA AACCCGGACA
GTACAGCCGC GCATTCCATT TGTGGCACCG GCGGGTGGCA CGGTTACGGA AATTGAGGCC
AGCGAGGGAC AGTACGTGGG TGAAGGGGCA TTGCTGTATC GATTGGCGAA CCTGGGCCAG
CTTTGGGTCG AAGCCGAATT GTATGCGGGT GAAGCCCGGT TTGTGAAAGT AGGTGACCGG
GTGCCGGTAC AGGTGGTGGG CTATGAAAAC AGTCCGATGA TGAATGCGCG GGTGACGTTT
ATTAACCCCG AATACCGGGC CGGTAGTCAG GTACTGGTGA TGCGGGCGGT GCTGCCCAAT
CCGGGGGGAC GTTTCCAGCC CGGTCAGCAG ACACGGGTGC TGCTTCGGCA CGGTGTGCAG
CGCGGGCTAA CGTTGCCGGT CGATGCCGTG GTGCGGGCGG GCGATGGAGC CGTCGTGTTC
GTGCAGACCG GTCAGGGAAT CTTTCAACCG CGACGTGTCG AGACGGGTAC CGAAACCGAT
CAGCAGGTCG CTATCACAAA AGGGCTTACC GGCGACGAAT CGGTGGCTAT GTCGGGGGCC
TATCTGCTGT ACAGCGAACT GATTCTTAAA AAGGGCATCA ACCCGATTAC GGCCAAGCCC
GATGAGGAAG GCGTAAAATC CACGCCAAAT ACGGAAGCAA ATCCCACCGC ACCGGCGGGG
ATGCGGCCTT CCGACCGGCC CGTTGCTGAA ACGGTAGCCC CAAAGAGCCA CAAAGCCCCT
GAAGGGTTTA AGAAGCAACT AACCGCTGTG TACGAAGCCT CGCTGAAACT GACGGAAGCC
TTTGTCGGCT CCAACCCAGG CCAAAGCAAG GCCGCTGCGG GCGGGGTCGA AAAAGCGTTG
TCAGGCGTAA ACATGATGCA ACTTTCCGGG CAGGCGCATA CGGATTGGAT GACGTACCTG
AACACCATGA GCGCGGGCCT GAAAGCCCTT AACACGACCA CTGATCTGGA AAAACAACGA
ACCGCCTACG CGCAGTTTGA GGATGGATTG TACCGGAGCG TCAAAGCGTT TGGCGTGACT
GACAAACCGG TGTATCGGCA GTTCTGCCCC ATGGCCCTCA ACAACAAAGG CAGCTATTGG
CTTAGCGACA AAAAGCCTAT TCGCAACCCG TATTTCGGGA ATCAGATGCT GACCTGCGGG
GAAACGAAGG AAGAAATTAA TTGA
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| Protein sequence | MSKRWIYGWA ALLVLLNTAC QSGGKATTKN DDSTRIAASD EHGGHNHGPD GAEKITYTCP
MHPQIVQDKP GSCPICGMDL VPVAKTGEKA TEIMLSESQM QLANVMVQPV ASGNIGNSTI
LNARLAADEQ QTDVISSRVA GRIERLYVKE TGQPIRKGQV LYEIYSEPLL TQQQEYLLAL
RQVEELNEPR YEDFRRASEQ KLKLYGMTAE QIAGLAKTRT VQPRIPFVAP AGGTVTEIEA
SEGQYVGEGA LLYRLANLGQ LWVEAELYAG EARFVKVGDR VPVQVVGYEN SPMMNARVTF
INPEYRAGSQ VLVMRAVLPN PGGRFQPGQQ TRVLLRHGVQ RGLTLPVDAV VRAGDGAVVF
VQTGQGIFQP RRVETGTETD QQVAITKGLT GDESVAMSGA YLLYSELILK KGINPITAKP
DEEGVKSTPN TEANPTAPAG MRPSDRPVAE TVAPKSHKAP EGFKKQLTAV YEASLKLTEA
FVGSNPGQSK AAAGGVEKAL SGVNMMQLSG QAHTDWMTYL NTMSAGLKAL NTTTDLEKQR
TAYAQFEDGL YRSVKAFGVT DKPVYRQFCP MALNNKGSYW LSDKKPIRNP YFGNQMLTCG
ETKEEIN
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