Gene Slin_6865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6865 
Symbol 
ID8716133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp31260 
End bp32039 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391613 
Protein GI284005794 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.432634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAA CCTGGCATTT ACGCATTCGC AAAACGCACC GCTACCTGGG GGTGTTCATT 
GGCATCCAGT TTCTGCTCTG GACGGTGGGC GGGCTGTATT TTAGCTGGTC GAATCTGGAC
GACATCCACG GTGACCACCT CAAACGCCCG GCTGTCGGAT TGTCGGCTTC GATGTCGCTG
GTTTCCCCGT CGGTTCCACT TCGGTCTTTG CAGCAAAAAG GTGTCGATTC TATCCTGAAC
ATAGCCCTTA TTGAGGTGCT GAACCAGCCT ATCTACCAGC TAAACTACCG AATGCAACAT
GGCAATGGTC ACGCGATGGC GCAGGTGCAG TTAGCTGACG CAGCGACGGG ACAACTCCGG
GGTGAACTGA CGCAGGCGGA GGCTACTGCG TTAGCCAGAC AACGCTTCGC GGGGCCATCT
ACCGTCGAGC GAGTCGAGTA TCTGACAAGT ACCAACGGCC ACCACGAATA CCGCGAAAAA
CCCCTGCCTG CCTACGCCAT AACGTTTCGG CAACCGGCGC ACGCGACGGT ATATGTGGCG
GCTCAGTTGG GCACCGTGCA GAGCGTTCGC ACCGATCCCT GGCGAATATT CGACCTGTTG
TGGATGCTGC ACACGATGGA CTACGAAGGC CGCGACGACA TCAACAACGG CTTACTGCGG
GCTTTCTCTA TTCTGGGCCT GTTAACCATC ACGTCAGGGT TCGCGCTCTA TTTTGTTTCC
TCGCCCCAAC TCCGACGAAA GAAAGTTAAT CGCCCTAAAC CAATTACACT TCAGTCATGA
 
Protein sequence
MNRTWHLRIR KTHRYLGVFI GIQFLLWTVG GLYFSWSNLD DIHGDHLKRP AVGLSASMSL 
VSPSVPLRSL QQKGVDSILN IALIEVLNQP IYQLNYRMQH GNGHAMAQVQ LADAATGQLR
GELTQAEATA LARQRFAGPS TVERVEYLTS TNGHHEYREK PLPAYAITFR QPAHATVYVA
AQLGTVQSVR TDPWRIFDLL WMLHTMDYEG RDDINNGLLR AFSILGLLTI TSGFALYFVS
SPQLRRKKVN RPKPITLQS