Gene Slin_6862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6862 
Symbol 
ID8716130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp29357 
End bp30040 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content52% 
IMG OID 
ProductMethyltransferase type 11 
Protein accessionYP_003391610 
Protein GI284005791 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC TGTCTCCGAC TTACAAACCA GCCCTGCGTT GGAACAGCCT GACCCGGTTT 
TACGACCAAA TCATGGCCCT GACTATGCGG GAAGACCTTT TCCGAATGCT GTTGCTTGAC
CCAATACGGG ATCAAAAGCC GCATTACGTA CTGGATGTCG GTTGCGGTAC GGGGACACAA
GCTCTGCTGT TGCATCGGCT CTTTCCTGAT GCCAGCGTTT TTGGTCTTGA TGGTGACGAG
ACGGTTTTGG CAATAGCCAG GCAAAAACAC GCCCACGCCG GGTGGCCCGT GACACTGGAA
CAGGGACTTT CGACGGCCCT CCCTTATCCC GATGGAAGCA TGGACATTGT GACCTGTAGT
TTATTGCTCC ATCACTTGTC GGATACAGAC AAAAAACAGT CAATCCGGGA GATGTGGCGG
GTGCTGATAC CGGGTGGCGC ACTTGCCTTA GCGGATTGGG GGGAACCCGC CAACGATGCC
ATGCGGCTGC TGTTCTACGG GCTTCAACTC TTTGACGGTT TTGATACAAC CAGGGCAAAT
GGACGCGGGC TTATACCAAA TATGCTCTAC GATGGTGGTT TTCGGCAGAT TACTCAGACC
GGACAAGTCA ACACCCTTTT TGGAACAATG GCCTTGTACT ATGCAGTCAA ACCAACCTAC
ATTAATCAAA CGACAATACG ATGA
 
Protein sequence
MKTLSPTYKP ALRWNSLTRF YDQIMALTMR EDLFRMLLLD PIRDQKPHYV LDVGCGTGTQ 
ALLLHRLFPD ASVFGLDGDE TVLAIARQKH AHAGWPVTLE QGLSTALPYP DGSMDIVTCS
LLLHHLSDTD KKQSIREMWR VLIPGGALAL ADWGEPANDA MRLLFYGLQL FDGFDTTRAN
GRGLIPNMLY DGGFRQITQT GQVNTLFGTM ALYYAVKPTY INQTTIR