Gene Slin_6675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6675 
Symbol 
ID8716086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp32852 
End bp34090 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content29% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391430 
Protein GI284005610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00251998 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTAA TAATTACTTA TATATTGCTA TTTTCATTTG AAACAACTTT GGCCCAAAGT 
GATATGAATT TTTTGTATGG GACTAAATTA GATTCACTGT CGTATGAAAA AAGAAGAATC
GAAAGTTTTT TTGGTTTGAA ATTAACAATT GATGGCAATA CAAAATTTAG GAGTTGCACT
TTAGTACAAG GTGTAGATCT TGAGTCGCCA ACATTTAAAG GTAAAGTAGA TTTTAGTAAC
TCTTTATTTT TGCAGAAAGC CGATTTTCAA AAACCTGAGT TTTTGAAAAG TTCCTACTTC
AATAATTCTG TTTTTTATAA AGGGGCAAAT TTTAGTGGAG TAATATTTTC TAAAACCGCA
AATTTTAGTG GAGCACAATT TCTGGACAAC GTCGATTTTA GCGATTCGGA ATTTAGTGAA
ATTGTTTACT TAAACAATGC AATTTTCCCT CAAAAGTTAA CCTTCAATGG TGCTAGATTT
GGAGAAGTAC CCAACTTCGA CTTTGCTCAA TTACCTGACT CCCTTATATT GAATAATGTA
AATTTGTCTT CTATTAAATC TAATATATTT TTCAATAATA TGGAATTAGA TTCTCTAAGG
AAACGAACAG GTAATCTAAA TCAAAAATGT ACCATTTTTC TTCACCATGT TGATTTTAGT
AAAATAGTAA TCAATTTCGA AAAGTTTAAA CTAGGGTTTA ATGAATCAAC TAATTATGAA
GATCGAGTAA GTCAGTATCA ACAATTAATT AAGAGATGTC AAGATTTAGG AATGGAGTCA
AGTGTTGAAG GATTTAGCAT TGTTTTGCAA AAACTAAAAT TACAGCAAGC TTGGGGAACG
TTTGCTCCGT TTTTTATAAA ATTCCAATAT TACTGGTGGA ATTTTGGCTT TAAACGAAGT
TTAATTTTGC GGAATATAAT TTTCGCATTT TTAATTTCAT TTATTATTTT TTTCATAGGT
TTTAAGAAAT TCGCACTTGT ATATTTTCCA GTAGATCAAC TGGGATTAAC ATCTAAAGAT
GCATTGATAC TATGTTACAA TCGCTCTTTG ATAAATCAAA TTAATAATAG ATTTAAAATA
GTTTTATTTT ACACAGCATT AATATTCTTT GGTTGGAAAA TGGATCATTC TAAGGTTAAT
TATCGAGCTT ATCCTTGGAC TTCTATATTA GTTTATTTGA TCTATGTAGT TGGATTAATA
CATATAGCCT ATCTTGTAGG TTTCGTAATT GATCATTAA
 
Protein sequence
MRLIITYILL FSFETTLAQS DMNFLYGTKL DSLSYEKRRI ESFFGLKLTI DGNTKFRSCT 
LVQGVDLESP TFKGKVDFSN SLFLQKADFQ KPEFLKSSYF NNSVFYKGAN FSGVIFSKTA
NFSGAQFLDN VDFSDSEFSE IVYLNNAIFP QKLTFNGARF GEVPNFDFAQ LPDSLILNNV
NLSSIKSNIF FNNMELDSLR KRTGNLNQKC TIFLHHVDFS KIVINFEKFK LGFNESTNYE
DRVSQYQQLI KRCQDLGMES SVEGFSIVLQ KLKLQQAWGT FAPFFIKFQY YWWNFGFKRS
LILRNIIFAF LISFIIFFIG FKKFALVYFP VDQLGLTSKD ALILCYNRSL INQINNRFKI
VLFYTALIFF GWKMDHSKVN YRAYPWTSIL VYLIYVVGLI HIAYLVGFVI DH