| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6178 |
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| Symbol | |
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| ID | 8729961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7482450 |
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| End bp | 7483439 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | |
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| Product | glycoside hydrolase family 16 |
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| Protein accession | YP_003390936 |
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| Protein GI | 284041006 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.474136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTA CCCGGGTTTC TTATTTACTG AGGTTACTGG TTCTGCCAGG CGCCTTTGTC
GCAACTACGT TAAGCTGTAG GCAAGATATC ATGTTACCTT GGGCTCCCGT TTCTCCGGTT
GTTACCAGTC AAGCTGACGA ATCAGGGATT CTGGGTTATG ATTATGCCCA ATCAGCTGAT
TCGATTTTGG CAATGGATGG CTGGAGCAAC ACCCTGGACG ATAACTTCGA CATAAGTCCG
ACAGATACAG CCAAGTCAAA CTGGAGGTGC TGGGTAGGGG GCGGCTTTAA CAATGAACTT
CAGCTATATA CTAATAGTCC GAATAACTTA ACACTTATTC AAGACCCTAC TGATTCAGCC
AATAAATTGT TGGTAATCAG GGTTAGAAAA GAGAAAGTGA AAGGGCCTAA ATATCGTTTA
GATATCGATA ATACTATAAA AGAATTTGAC TTCACCTCGG CCCGGATTGA ATCAAAAAAT
GTGTTTACAC CCACCCGTAC CAAAGGTCAG GTTCGGATGG CTGCCCGGAT CAAACTATCT
ACCGGCTACG GCATGTGGCC TTCTTTCTGG TCTTATGGCG AAAAGTGGCC AACCAATGGC
GGTATTGCCA TTGTACTATC TCGTGGGCAG CAACCCTACC ATTTTCAGAA TGCTTACTTC
TATGATAATG AGCAGAGCCG ACGGCCCGTT CCCAGAGAAG AAAAATACTT AATCAGCGCT
ACCAACCTGA CGGATCGCTG GCATGTGTAT GAAGTAATCT GGCAGAAAGA CTCACTAACG
TTTTTGCTGG ATGGTCAGAT TGTTGACATC AAGCAGGGTA ATTATGTGGG GAAATTGTTT
GAAAAACCAC AGCGAATCAC ATTGAATCAG GCTGTTGGCG GAGACTTCTT TTTGATGGAG
GATACTCTTC CCACTGCCGA TGAAATACCC CTCAATGAGA ACGAAGGGAT TATGCAGGTT
GACTGGATAA AAGTTTATTT GAAAAACTAA
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| Protein sequence | MKRTRVSYLL RLLVLPGAFV ATTLSCRQDI MLPWAPVSPV VTSQADESGI LGYDYAQSAD
SILAMDGWSN TLDDNFDISP TDTAKSNWRC WVGGGFNNEL QLYTNSPNNL TLIQDPTDSA
NKLLVIRVRK EKVKGPKYRL DIDNTIKEFD FTSARIESKN VFTPTRTKGQ VRMAARIKLS
TGYGMWPSFW SYGEKWPTNG GIAIVLSRGQ QPYHFQNAYF YDNEQSRRPV PREEKYLISA
TNLTDRWHVY EVIWQKDSLT FLLDGQIVDI KQGNYVGKLF EKPQRITLNQ AVGGDFFLME
DTLPTADEIP LNENEGIMQV DWIKVYLKN
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