Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6126 |
Symbol | |
ID | 8729907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7425130 |
End bp | 7427016 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | histidine kinase |
Protein accession | YP_003390885 |
Protein GI | 284040955 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCTGG TTCGAAAGTA TAGTTTTGGT CTTTTTATGA TGGTATGGCT CACCGGACAT GCTCAATCGA TTACCATCTC AACATGGCGG CTTCAACTGG CCCGTGCAAC TGCCGACAGC AGTCGGAGTA ACTTATGTTA TGCGTTGGGA AAACAGTACG AACAAGTTAA TCTCGATTCC TGCCTTTATT TTCTTACAAA ATCCATACAG ATTGCCCAGC GTATTCATGA TCCTGTAGCT ACGACCCGAG CTATGTATCG GCTTGGGCAA ACCTACATGT TTACGCTAAA AGATGAAGGC AAAGCGGTAG ACTGGTTCAA TAAGGCTATA GTACTGGCAA AAGCCGATAA CAACAATGCG TGCCTGGCTG ACTGTTATCG GTTACTGGCT GTTTGTGCTG ACCATCAACG CATCGGTAAT ACGGAAGAGT TGATGGGTAA AGCCGTTAGC TATGCCAAAA AATCGAATAA CTGGCGCATA CTGACCAATA CATATCAGGT ATGTAGTGGT AGGTATGCCC TCCGTAAAAA CTATCCTTTA GCCGAGAAGT ATAGTAAGCT GGCTATGGCT AGTTGTAAGC CATATAATCT GGATAACTGG TTTACGTCGG GATTAGACCT TCATGATCTG CTGTCGGTAC AGGGTAAACA GGTTGAAGCA CTGGCACTTG CCCGCCAGCT AGCATCGTTT AAAGACAAGT TGCCCAAAAC GGATGGGGAG TTTGTGTACA TCAATGATGT CGCAAATCTG GACAGAATTC TAAAACGTTA TACTGAAGCC GAGACAATTC TACTGAAAGG AATAACTGCT GAAAACCAGC GGACACATCC GGATTCGCTT CATTTACGCT ATTTGTATCA AAGCTTACTC CATACGTACG TTGATCAGGG AAAGTGGCAA AAAGCCTATA CATACAGCGA AACGCTGGCG GATATCAGAC TCTGGCTACA ACAAAAACGA CAAACTCAGG ATGCCAAGCT TCAGATGACT CAACTAAAGG CGGTACTGGA TATTGAAAAG AAAGATAGCC AGATTATACT GCTGGATGCA CAACGACAGC AACAACATAT TTTCCTGATT GCGGCACTGC TGGTAGCCGG TTTGCTCGTT GGATTTATTG TGGTACAACG GCGAAATCAA AAGCGAATAG AGCGTCAGAA GGCTACGTTG ACTCAACTCA ATGCGACCCA GAATAAGCTG TTCGCTATGC TATCGCATGA CTTACGATCA CCGGTCGCTA ATCTGCAAAG CAACGTCATG CTCACAAACT GGGGCGCATT AAGCCAACAG GAATTTGCCG AATCAACCAA AAGTCTGAGC CTTGATATCG GCAATGTCGC CACCATGCTC GATAATGTGC TGAGTTGGTC TGTCTCGCAA ATGAATGGTA TAAAACCCAG AATAGAGACC ATTAAAATAG CGCTGCTTAT TGAGGAGCAG ATGATGTTTT TAACATCGCT TGCAAACGCC AAACAGATTC AGCTTGTCAA TAAAACTCCT GTTGATGCGT GTTTGCTGGC TGACAAAAAC CACCTGTCGG CTATTCTCCG CAATCTGCTG CAAAATGCGA TCAAGTTTAT GCACGCAGGT GGTGCTGTGT GGGTAGATTT TCTGGAAAGC GAGGGCTTTA GCCGATTAAC CGTTCAGGAT ACGGGCATTG GCATGGAGCC ACAATTAGTG GCCAATCTAT TCGCCCTGGA TAAACAAACG TCCCGTCTGG GTACGAACCA TGAGCAGGGC ACGGGCCTGG GCCTGATACT GGTAAAGGAG CTGGTTGAAG CCAATGAGGG CCTTATCACT GTAAATAGCG CTGTCGACCA GGGGACTACG TTCACGCTGA CGTTTGCGAA TCAATTTGGT AAGCGTACTG GCAGCCCTGT TTTATAA
|
Protein sequence | MTLVRKYSFG LFMMVWLTGH AQSITISTWR LQLARATADS SRSNLCYALG KQYEQVNLDS CLYFLTKSIQ IAQRIHDPVA TTRAMYRLGQ TYMFTLKDEG KAVDWFNKAI VLAKADNNNA CLADCYRLLA VCADHQRIGN TEELMGKAVS YAKKSNNWRI LTNTYQVCSG RYALRKNYPL AEKYSKLAMA SCKPYNLDNW FTSGLDLHDL LSVQGKQVEA LALARQLASF KDKLPKTDGE FVYINDVANL DRILKRYTEA ETILLKGITA ENQRTHPDSL HLRYLYQSLL HTYVDQGKWQ KAYTYSETLA DIRLWLQQKR QTQDAKLQMT QLKAVLDIEK KDSQIILLDA QRQQQHIFLI AALLVAGLLV GFIVVQRRNQ KRIERQKATL TQLNATQNKL FAMLSHDLRS PVANLQSNVM LTNWGALSQQ EFAESTKSLS LDIGNVATML DNVLSWSVSQ MNGIKPRIET IKIALLIEEQ MMFLTSLANA KQIQLVNKTP VDACLLADKN HLSAILRNLL QNAIKFMHAG GAVWVDFLES EGFSRLTVQD TGIGMEPQLV ANLFALDKQT SRLGTNHEQG TGLGLILVKE LVEANEGLIT VNSAVDQGTT FTLTFANQFG KRTGSPVL
|
| |