| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6057 |
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| Symbol | |
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| ID | 8729838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 7352197 |
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| End bp | 7354536 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003390818 |
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| Protein GI | 284040888 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGTCA GGCTATTTAT TAATTTATTA CTCGTACTCG TCCTTTTTCA GGTTGTAACG
GTTCCCTCGG TAGCTCAGGA TACGGCTGCC AAAGAGATTC CGCTGCCTCA AACCATTCCG
GATACATTAT TATTTAAAAT TCAGAAGGCT CAATCCGTCA TTTCGCAGAT CAAGGCGTCC
AATAAACGGA AATACGGTAT TTCCCGCATA CGGTCGGGGC TGGCCGATGT GAAGGCGAAC
CTCGCGCCCA TTGTTGCCGA CATGCGGGCG CATGGCCAGG AAGTCGACAC CAAGAATCTG
GTCAACTATA GCCTGATTCT GAACGACGGG CTGAAAAAAC TAACCGACTG GCGAACAACG
CTTTCTAAGT CAAACAATGA TTTACAGTCG AATCTGGACC AGGTGCTGGC CCTCAGCACT
GATTCATTAT TAACGGTAGA CGGAAGTGAC ACGACCGATA AAAAGCTGTA TGCCGATCAG
CTCAGAAGTC TTAAATTTCA GCTACAGGAC GCGGGCACCC GAACCAGTGC CCAACTGGAC
ACTGTCAGCC GCTTGCTGGC CGACGTGTCA GGTACTTACT TAACGATTGG CAACCTGCAG
ACAACCATTA ACGAACGGTT GCAAAAGTCA TCGGAAAATA AATTTCAACA AGAAGCCCCC
TATTTATGGG ACGCACCGGC TTTACTGTCG TTCGGGGATT TTCCCCGGCT TCTTCAGTCA
AGCTTTCAGG GGCAAAGTAA AATTTTCACT TATTTCGTTT CTGCCACCTG GGATAACCGC
ATTCTGCTCA TTATGCTGTG CGGCCTGTTT TTTGCCTGGG TGTTTTTCAA CTACAAAAAA
GCGAAAACGT CTTCTTTACA GGATAAGATA ACCCCGCTGC GTTCCGAGTA CCTGAAACCG
GTGCCGGTGC TTGCCTCCCT CATTGTATTG CTTAACCTGA CTCCCCTCTT TGAGCCGCAA
TCGCCTTCGC TGTACGTCGA GATTACCCAA TTTCTGTTGT TTGTGGTGCT TACCGTTCAA
TTTTGGTCGC GGTTCTCGCA ACATGAACTC CGGATGTGGC TCCTGATCGG CACAATGTAC
ATGCTGCTCG TAGTTGCCAA TGCCCTGGTT GGCGATCCGC TGTTTATGCG CCTTGGCCTG
ATCGCCCTGA ATATCGGCTT TATTTACATA GGCCTCGTGT TTTCCCGCCG GTTGCCCCGC
CAGCATATTA GTGCCCGGGT TGTTCGGTTT GTTACGTCAT TATACATGGT GCTTCAGGTA
CTGGCCATCA TCCTGAATAT TTTCGGACGC ATTAGTCTGG CCAAAACGTT TGGGATAACC
GCCGTTATCG GACTGATGCA GCTTACGGCG CTGGGTGCCT TTATGGAAAC GATTCTGGAA
GCCCTGGATT TGCAGATCAA CCTGAGCACA AGTTCGGAGG GCCTTTTTTC AAGGGTCAAC
GTCAACCATA TTCGCCGGTC GTTCCGAAAG GGGCTTTCCT TCATAGCCGT TACGTTGTGG
CTAATCGTCT TTTTTATCAA CATCGGCGCG GCCGATACCG TATTTAATAT CCTGCACCAC
ATCCTCACCA GACCCCGTTC CTTTGGCAGC CTGACATTCA CGCTGAGCAA TGTGTTGTCG
TTTTCAATTA TCATCTACCT GTCGAGTCTG CTTCAGAAAA ACATCGGGCT GCTGTTTGGC
GAGAGCCAAC TGCCGACAGA AACTGAGCAG ATCGGGCAGC TGAGTTCGGT GCTGGCGCTG
GTTCGCCTGG TCATTGTCAT TGCCGGGGTG TTACTGGCTA TCGCGACCTC CGGCATATCT
GTCGATAAGT TCACGGTTGT GCTGGGTGCG CTCAGTGTGG GCATTGGCCT GGGGATGCAG
AACATCGTGA GCAACTTCGT ATCGGGCGTA ATCCTGATTT TCGAGAAACC CTTCAAAATT
GGCGATTACG TAGAACTGGC CGATAAAAAA GGACGGATTC GCGACATTGG CATCCGCTCA
AGCCGGATGA TTACCCCGCA AGGCTCCGAA GTAATTATCC CCAACGGCGA TTTATTATCC
AACCGGCTCG TAAACTGGAC ATCGGGCGAT ACGTACCTGA AAACAGAGTT CACGCTGAAA
GTAAGTGCTG ATACGGACCT ACAGGCCGTT CAGGAAATTG TAACCAACGA AGTGAGTCAA
CTGGAGGGTA CGCTACCAAA CCGACCGGCG GAGGTAATCG TAACGGCTAT CGGGGGCGAC
AGCGTCGAGC TAAAAATACA GGTTTGGCTA ACAAGCGTTT ACAGCGAGGT TTCCTTGAAA
AGCCAATTGT TCCAACGCTT ATTGACGGCG TTCAAAGGGG CATCTATCAA ACTACTCTAG
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| Protein sequence | MFVRLFINLL LVLVLFQVVT VPSVAQDTAA KEIPLPQTIP DTLLFKIQKA QSVISQIKAS
NKRKYGISRI RSGLADVKAN LAPIVADMRA HGQEVDTKNL VNYSLILNDG LKKLTDWRTT
LSKSNNDLQS NLDQVLALST DSLLTVDGSD TTDKKLYADQ LRSLKFQLQD AGTRTSAQLD
TVSRLLADVS GTYLTIGNLQ TTINERLQKS SENKFQQEAP YLWDAPALLS FGDFPRLLQS
SFQGQSKIFT YFVSATWDNR ILLIMLCGLF FAWVFFNYKK AKTSSLQDKI TPLRSEYLKP
VPVLASLIVL LNLTPLFEPQ SPSLYVEITQ FLLFVVLTVQ FWSRFSQHEL RMWLLIGTMY
MLLVVANALV GDPLFMRLGL IALNIGFIYI GLVFSRRLPR QHISARVVRF VTSLYMVLQV
LAIILNIFGR ISLAKTFGIT AVIGLMQLTA LGAFMETILE ALDLQINLST SSEGLFSRVN
VNHIRRSFRK GLSFIAVTLW LIVFFINIGA ADTVFNILHH ILTRPRSFGS LTFTLSNVLS
FSIIIYLSSL LQKNIGLLFG ESQLPTETEQ IGQLSSVLAL VRLVIVIAGV LLAIATSGIS
VDKFTVVLGA LSVGIGLGMQ NIVSNFVSGV ILIFEKPFKI GDYVELADKK GRIRDIGIRS
SRMITPQGSE VIIPNGDLLS NRLVNWTSGD TYLKTEFTLK VSADTDLQAV QEIVTNEVSQ
LEGTLPNRPA EVIVTAIGGD SVELKIQVWL TSVYSEVSLK SQLFQRLLTA FKGASIKLL
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