Gene Slin_6011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6011 
Symbol 
ID8729792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7292592 
End bp7293203 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content49% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003390772 
Protein GI284040842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATCA CAGAACGGAA AGAACGGGAA CGGGAGGAGA TGCGGAAGCT TATTTTAGAT 
GCCGCACTAA AATTGTTTTT AACCAATGGA TTCGACAAGG TGAGCATTCG CAACATTGCC
GATGAAATTG AATACAGCCC AGCCACTATC TATCTGTACT TCAAAGACAA GAACGAATTG
TTGTTTGCTC TTCACCAACG CGGTTTCGCT CAGATGGTGC AGGAGTTTCA GCCGTTGCGC
CTATTGGTAG ACCCTTTCGA AAAACTGGTC GAGATGGGGC GGGCATATAT CCGTTTTGCC
GTCCAAAACC CGGAGCTGTT CGACCTGATG TTCATTATGA CCGCCCCCAT GGATAAACTC
GATAAAGAAG ACTGGGTGGA GGGGGATCAG GCATTTGGGC TGCTAACGCA GGTAGTGCAG
GAATGCATGG ATACGGGCAT CTTCCAGCAA CACAATGTAC AGTCGACAGC CATGATGATC
TGGAGCAGCA TTCATGGCTA TACCGCTCTT TTTCTGCGTA AACGCCTGGG CATGTTTGCC
GAATGCGACG TACCAGTGAT TATGGACGAT GCCTTCAATT TGTTCTGCGA AACGCTGCGG
AAAGGCTTAT AA
 
Protein sequence
MGITERKERE REEMRKLILD AALKLFLTNG FDKVSIRNIA DEIEYSPATI YLYFKDKNEL 
LFALHQRGFA QMVQEFQPLR LLVDPFEKLV EMGRAYIRFA VQNPELFDLM FIMTAPMDKL
DKEDWVEGDQ AFGLLTQVVQ ECMDTGIFQQ HNVQSTAMMI WSSIHGYTAL FLRKRLGMFA
ECDVPVIMDD AFNLFCETLR KGL