Gene Slin_5939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5939 
Symbol 
ID8729720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7198177 
End bp7198569 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content45% 
IMG OID 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_003390700 
Protein GI284040770 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCC GACGTAAAAG TAAATTTGCT GCTGAAGTTG CGACTTCGTC CCTGAACGAC 
ATCATGTTTT TCCTGTTGTT GTTCTTCCTG ATCATTTCGA CGGTAGCGAA TCCTAATGTG
ATCAAGCTGT TACTGCCTAA AGCAGCCTCA ACCCAGCAGT TGAGCAAGAA ACAGGTAACG
CTATCGGTTG ATGCCGACAA AAAATACTAT ATCGATAAAA AACCGGTCGA TCCGGCCAAT
CTGGAGAATG AATTGAAACA GATCATGGCC GGTATTGCTG AGCCAACCGT TGTGGTTCGT
TTCGACAAGA CCTTAACCGT ACAGGATTTG GTTGATGTGC TGCAAACCGG GGCCAAGTTG
AATATCAAGA TGGTGATGGC CACTTCCAAA TAA
 
Protein sequence
MKLRRKSKFA AEVATSSLND IMFFLLLFFL IISTVANPNV IKLLLPKAAS TQQLSKKQVT 
LSVDADKKYY IDKKPVDPAN LENELKQIMA GIAEPTVVVR FDKTLTVQDL VDVLQTGAKL
NIKMVMATSK