Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5690 |
Symbol | |
ID | 8729465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6925965 |
End bp | 6926774 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | Tetratricopeptide repeat protein |
Protein accession | YP_003390454 |
Protein GI | 284040524 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTCC GGATGAATCT GATACAGTGG ACTTTAGTTG CGTTACCGTT TTTGTCGGCA GCTCAACCTA AGCAACTTAT TATATCGGCA CGTTCAGGCG ACTCCATTCG GCGAAATCCG CCCGCCGAAA AACCTGTTGA AACGATTGCT CATCAGGCTC CCGAATCGGT TTCGGCAGAT GCAACAGAGA CTGCTGGTGT TTCGGTAAAT GTCCTTCCTC TTTTTGGCGA GCGGGCCAAA ACCACCGAAC AGATTGACGC TGAAATTCAC TTTCTGAACG ACTGCGACCG GAATTTTGCC AGTCGCCCGG AAGCCAGTGA TTTTTTTGCC GCCCGCGGCT GGGATTATGT ATCAAGCGGT CAGTTGGATA CCGCTGCACA CCGGTTCAAT TTATCCTGGC TGTTGAATGA TCATAACGCC GACGCGTACT GGGGGCTGGG TGTTGTGTGC TACCAGAAGA ATCAACTCCC GAACGCTATT CGAATGCTCA AAAAAGGGCT GGCTGTAGCT GATAGCAACG TCGCCCTGAT AACCGACTTA GCAACTGTTG AGATTAAACA CTATCAGGAA AAGCCGAATC CAGATTTGCT AACAGAAGCG GAAGGCTTCT TGAACCATGC CGTCGCCTTA AGCCCGGATA ACGCAGGAGC GATTCAGAAA CTGTCTGTTG TCTATTTTTT GAAAGCTGAT TATCCCAAAG CATGGGACTA TTTTCATCAG GCTCGTAATC TGGATTTGTC GGTGCTTGAC CTCAGCTATT TGAATGAGTT ACTAGCCAAG TACCCCGACC CTAAGCGAGT ATTCAAGTAG
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Protein sequence | MNVRMNLIQW TLVALPFLSA AQPKQLIISA RSGDSIRRNP PAEKPVETIA HQAPESVSAD ATETAGVSVN VLPLFGERAK TTEQIDAEIH FLNDCDRNFA SRPEASDFFA ARGWDYVSSG QLDTAAHRFN LSWLLNDHNA DAYWGLGVVC YQKNQLPNAI RMLKKGLAVA DSNVALITDL ATVEIKHYQE KPNPDLLTEA EGFLNHAVAL SPDNAGAIQK LSVVYFLKAD YPKAWDYFHQ ARNLDLSVLD LSYLNELLAK YPDPKRVFK
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