Gene Slin_5670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5670 
Symbol 
ID8729445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6909021 
End bp6910142 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content45% 
IMG OID 
Productcytochrome c oxidase subunit II 
Protein accessionYP_003390434 
Protein GI284040504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTATA TAGTCGCATT ATTAGCAGTA GTCTTTTTAG GCTTGGCCGC AATGGTCGTT 
TCCAAAATGG CTGCTGTTGT TAAGAACGCA GGTGGCCCTA AAGAGGAAGG GCAGATTGGT
TTGAGCAACA AGATCAATGG TGCGTTGTTT GTTGTCTTTT TTGTTGTTGG TCTGATAGGT
GCTGTTTGGT CGTTCATGTA TGCCCGACAG TTCTTTTTAC CTGAAGCATC GTCTCCTCAT
GGTCGGCGTA CTGACAACTT GTTCTGGATT TCAATGGCTA TGATCACTGC TGCGTTTGTC
TTAACAAATG CTCTGTTGTT TATCTTCGCC TGGATGTATC AGCACAAAGA AGGGTACAAA
GCCGCTTATT ACCCGGAAAA CCATAAACTG GAGTTGATCT GGACAATTGT TCCGGCTGTT
ATTATGGCTG TCATGGTATT CACTGGCTGG AGAGCCTGGC GGGATATTAT GGCGGAAGCA
CCAGCCAATG CACAGGTGTT CGAAATCGTA GGGAAGCAGT TTAACTGGAT TGCCCGCTAT
CCGGGTGTCG ATAACAACAA GCTTGGTAGC TTCAACTACA AATTGATTGA CAACAACAAC
GAGACAGGAA TCGATTATAC AGACGAAGCT TCTTTCGATG ATTTTGTGTC AACTTCGGAA
TTGCATATTC CTGCCAACAA ACCAGTTTTG CTGAAGATCC GGGCTCGTGA CGTACTACAC
AGTGTGTTTA TTCCTCACCT GCGTGTAAAG ATGGACGCCG TTCCAGGTAT GCCAACCCGC
TTTTGGTTCA TTGCGGATAA AACAACGGAT GAAATGCGTA ACATCACTGG TAACCCTGAT
TTTACCTATG AAATTGCCTG TACAGAAGTA TGTGGACAAG GGCACTTTTC GATGCGTATT
CGCCTTGTTG TAGAAGATGA GGCAGCTTGG GAAGCCTGGT GTAAACAGCA AAAACCATTG
CTGACATCAA CTCCTGAACT AGCAACCCGA ATTCCAGCAA GTTTAAAAGC AAAAGCAGCT
AAATATTTGC CTGCTGATGC CACCGCTGCT CCAGCTGATA GTTCCACTGC GTCTGTACCA
CAACAAGGTG GAGTTTCTGT AGCTACAACT ACACTCCGTT AA
 
Protein sequence
MVYIVALLAV VFLGLAAMVV SKMAAVVKNA GGPKEEGQIG LSNKINGALF VVFFVVGLIG 
AVWSFMYARQ FFLPEASSPH GRRTDNLFWI SMAMITAAFV LTNALLFIFA WMYQHKEGYK
AAYYPENHKL ELIWTIVPAV IMAVMVFTGW RAWRDIMAEA PANAQVFEIV GKQFNWIARY
PGVDNNKLGS FNYKLIDNNN ETGIDYTDEA SFDDFVSTSE LHIPANKPVL LKIRARDVLH
SVFIPHLRVK MDAVPGMPTR FWFIADKTTD EMRNITGNPD FTYEIACTEV CGQGHFSMRI
RLVVEDEAAW EAWCKQQKPL LTSTPELATR IPASLKAKAA KYLPADATAA PADSSTASVP
QQGGVSVATT TLR