Gene Slin_5334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5334 
Symbol 
ID8729099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6497717 
End bp6498091 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content40% 
IMG OID 
ProductDNA binding domain protein, excisionase family 
Protein accessionYP_003390102 
Protein GI284040172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.329966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTCG AGCAAGAGCT AATTACTGAA AATCCATTTG CTATTTTGGT TCGACGGATG 
AACCGAATAG AATCGCAAAA TGAGCAGATT TTAAACTTTC TGCAAAACAG AAACGCCACA
ACCTCAACTG ATGAGGTACT TACCATTCAG CAAGCGGCCA AATTTCTTGA CCTAACTACA
CAGACTATTT ATAGTCTTGT TTCGGCCCGT AAAATTCCGT TTTCCAAGCC TACAGGTTCC
AGGCTATATT TTTCTCGTCT TGAGTTGATT GAATGGCTTA AAATGAATAG GACAAGCACT
GTTCAAGAGC AAGCTTTCAT GTATGATCAA ACCAAATCAT TGCGTAGATC GAATAAAGGG
CGGAAGGCTG CATGA
 
Protein sequence
MSFEQELITE NPFAILVRRM NRIESQNEQI LNFLQNRNAT TSTDEVLTIQ QAAKFLDLTT 
QTIYSLVSAR KIPFSKPTGS RLYFSRLELI EWLKMNRTST VQEQAFMYDQ TKSLRRSNKG
RKAA