Gene Slin_5171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5171 
Symbol 
ID8728937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6316303 
End bp6317100 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content50% 
IMG OID 
Productprotein of unknown function DUF81 
Protein accessionYP_003389942 
Protein GI284040012 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC AGGAGTTATT TGGCTACGCA TCAGCCATTG TAGTAGGCCT GGTAATCGGG 
TTAGCAGGTG GGGGTGGTTC AATCCTGACT GTACCTATTT TCGTATACGT TTTCAATATA
CCCACCGTGC TGGCTACTAC CTATTCGCTG TTCGTGGTTG GCTCTACCTC GCTGGTCGGT
TCGCTTAATT ACATCTGGCA CCGAAAAGTC GATTTACGTG CAACAGTCGC GTTTGCACTG
CCGTCGTTCA TATCCGTTTA CCTGAGTCGT CGGTTTCTGG TTCCGGCCTT GCCCGATCCG
CTGTTTCAGT TTGAGCGGTT TGTTTTATCG AAGAGTGAAG CTATTTTATA TTTCTTTGCC
ATCGTTATGA TCATTGCCGC CCGCGCCATG ATTAAGAGCG ACCGCCCGGA GCAGGGCGAA
GCCGCCGATG GGCGTCCGCG TTATGGCAAT CTGGCCCTCG ATGGTCTGGC AGTTGGTTTA
TTGACAGGTA CAATTGGCGC CGGAGGGGGG TTTCTGATTG TACCCATGCT GGTGCTCATG
GCCGGTCTGC CTATGCCCAG AGCCGTGGCT ACCTCCGTGT TGATTATTGC GGTCAATTCA
TTCGTTGGGT TTATTGGCGA TATTCAGCAC ACCCAACCGG ACTGGAATTT TCTACTACCC
TTTACGGGTT TATCCATTAT CGGTATTTTT ATTGGTATGT ACTCGGCTCA GTTCGTACCA
CCCGATAAAC TTAAAAAGGG GTTTGGCTGG TTTGTTCTGG TCGTGGCCCT TTACATGATT
AGTCGGGAAA TAACCTAA
 
Protein sequence
MSEQELFGYA SAIVVGLVIG LAGGGGSILT VPIFVYVFNI PTVLATTYSL FVVGSTSLVG 
SLNYIWHRKV DLRATVAFAL PSFISVYLSR RFLVPALPDP LFQFERFVLS KSEAILYFFA
IVMIIAARAM IKSDRPEQGE AADGRPRYGN LALDGLAVGL LTGTIGAGGG FLIVPMLVLM
AGLPMPRAVA TSVLIIAVNS FVGFIGDIQH TQPDWNFLLP FTGLSIIGIF IGMYSAQFVP
PDKLKKGFGW FVLVVALYMI SREIT