| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5066 |
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| Symbol | |
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| ID | 8728831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6189913 |
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| End bp | 6192918 |
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| Gene Length | 3006 bp |
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| Protein Length | 1001 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003389840 |
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| Protein GI | 284039910 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000778295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCTAT TCTGCGTGAT GAGCTTCAGC GCAATAGCTC AAACGAAGGT TGCCGGGAAA
GTGATTGCCG ATGATAAAAA AGAGGAGTTA GCTGGTATAA GCATCGCCGT GAAAGGAAAG
GTTATTGGCA CCATTACCGA CCAGAAAGGA AATTTTTCCT TTACAACCAA CACGCCAACA
CCGTTCACGG TCGCTATCTC CGGGGTTGGT TTCGAAACGC AGGAGTATGT GATCAATGGC
AACCGTACGG ACCTGAACGT AAGCCTGAAA GAACAGGTGA CGATTGGTCA GGAAGTGGTC
GTATCAGCCT CCAGGGTCGA AGAAAGTGTC TTGAAATCAC CGGTATCCGT TGAGAAAATG
GATATTCGGG CTATTCAGTC TACACCTTCC GTTAATTTTT ATGATGGCTT AGCCAACGTA
AAAGGGGTCG ATGTGGCCAC ACAGGGAATG CTGTTCAAGT CGATAAACCT GCGGGGTTTT
GGCGCAACGG GTAACCCAAG AACCGTGCAG TTGATCGATG GGATGGACAA CTCGGCACCG
GGTCTGAACT TCCCGGTCGA TAATATCGTA GGTGTTCCGG AGCAGGACGT TGAAAGTGTC
GAGATTTTGC CCGGCGCGGC TTCTGCCCTT TACGGACCCA ATGCCATTCA GGGGCTGATT
CTGATTAATA GCAAAAGCCC GTTCCTGTAC CAGGGGTTGA GCGCTAACGT CAAAACGGGT
ATTATGGATG CATCGAACCG GACAACGTCT ACAACGGGTT TTTATGATGC GTCCATTCGG
TACGCTAAAG CGTTCAATAA CAAGTTTGCT TTCAAGATGA ACCTATCTTA CATAAAGGCA
AAAGACTGGG AAGCAACGAA TTACACGAAC CTGAATGGTG CTGGAAATTC TGATCCCAAC
CGGGGAGCGG GTACGGCTGT CAACTATGAT GGCGTAAACG TGTATGGCGA TGAGAACCAG
CAAAATATGC GTACGGTGGG TCAGGCGTTG ATCGGGGCGG GTCTTTTGCC TGCTGCTGCC
CTGAACATAC TGCCTAACGT AAACATCAGC CGTACGGGTT ATCCCGAAGT GAATCTGGTT
GATTACAACA CCAAAAGCTT TAAGTTCAAC GGCGCGCTGC ACTACCGAAT CTCGGATAAG
GTCGAAGCCA TTGGCCAGCT GAATTATGGT ACCGGTACCA CCGTTTATAC CGCTACCGGC
CGGTATTCGT TACGGGATTT CAGCATAGCG CAGGCCAAGC TCGAACTGCG GGGCGATAAT
TTTATGGTAC GTGCCTACAC AACGCAGGAG CGGTCGGGTA AATCATTCAC GGCAGGTTTG
GCCAGTATTG GCTTTAACGA GGCCTGGAAA CCAAGTGCTA CCTGGTTTGG GCAATATGTT
GGGGCGTATG CAGCCGCCCG GGGAGCCGGT CAGGGAGATG ATGCCGCCCA ACTGTCAGCT
CGTGGCATAG CCGATCAGGG TCGCCCGATA CCCGGTACAG AAGCGTATAA GGCTTTGTAT
GATAAACTAA GCTCGACGCC CATCAGTCAG GGGGGCGGGG CCTTCTCCGA CAAGTCGAAC
CTGTATCATG TAGAAGGGCT GTACAATTTT AAAAACCAGA TTAAGTTTGC CGATGTACTG
GTTGGAGCCA ACTACCGGCA ATACCAGTTG GCTTCGGAAG GAACGCTCTT TGCCGATCAG
GCGGCCGGAC GCAACGGTAC CATTGGTATT ACGGAGTTCG GCGGGTTTAT TCAGGCCAGT
AAATCCCTGT TCAGCGAACA CCTCAAGTTG ACGGCGTCGA CCCGTTACGA CAAAAACCAG
AATTTCGAAG GGCAGTTTAC GCCCCGTGTA TCGGCCGTAG CAACCTTCGG GGAGCACAAT
ATCCGGTTAT CATACCAGAC TGGTTTCCGT ATTCCAACCA CGCAGAATCA GTATATCGAC
CTGAAAACGC CACTGGCCCG GCTGATCGGT GGTTTGCCGG AGTTTTCGGA TCGTTACAAT
CTGGCGAACT CCTACTCCCG TACTGATGTA ACCGCCCTCG GCGCTGCCAT CACCGCCAGT
GCTGCCAGCC CCACCGTTCA GCAGGCCGCC GTACAGCTGA TTACGCAGCA GGTGACAGCG
CAGGTGACGG CGCAGGTAAC TGCTCAGGTA AATGCCGCCG TTGCCGCCGG TCAGATTCCG
GCCAGTGCTG CCGCAGCAGC CATTCAAAGT GCAGTTGCCT CTACCTTAAC TGCGGTGTTG
CCCGGTCAGA TTGCCGCCAA TATCAACAAT GCAGTAACAG CCGTAGCTAT TAACAGCAAT
ATTGGCAACC TGAAGCCTTA CCAGCGGCAG GCATTCAAGC CGGAGCGTGT GGCGAGCTAT
GAAATTGGTT ACCGAAGCGT ACTGGGTAAG CGCCTGTTTG TCGATGCCTA TTATTACTAT
AGTGTGTACA CAAATTTCAT TGGCAGCGTT ATCCTGCTTC AGCCAACGGC TCCGGTGGCT
GCGGGCCTGC CGCTGGCATC CGGTGTGTTA AGCGGAGGAA CGCGGAATGC GTATTCGATG
CCTGCCAACA GCAGCGAAAA AATCAATACG TCGGGTTGGG CGCTGGGTCT GAATTATCAG
TTACCAAAAG GTTATGGTAT ATCGGGTAAT CTGGCCAACA ACAAGCTCAA TAACTTCACG
CCAACGGCGG AGCTACAGAC ATCGGGCTTC AACACGCCGG AATATCGCTG GAACTTAGGC
TTCACCAAAC GGCCTATGGC TAACTCGAAT ATTGGCTTTG CCGTTGCCTT CAAACATCAG
GATGCGTTCA CCTGGGAGGG CTTTGCCGTA CCTACCGAAC TGGTGCCGAA TCTGTACGAG
AAAACAATTG TACCGGCTAT CAGTAACTTC GATGCGCAGG TCAATTACAA GGTGTCAAGC
CTTAAGTCGA TTGTGAAAGT GGGTGCAACC AACCTGTTTG GAAAGCCTTA CTTCCAGGCC
TATGGTAGTT CATACGTTGG TTCGACCTAC TACATCAGCC TGACGTTCGA TCAACTGATG
AACTAG
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| Protein sequence | MGLFCVMSFS AIAQTKVAGK VIADDKKEEL AGISIAVKGK VIGTITDQKG NFSFTTNTPT
PFTVAISGVG FETQEYVING NRTDLNVSLK EQVTIGQEVV VSASRVEESV LKSPVSVEKM
DIRAIQSTPS VNFYDGLANV KGVDVATQGM LFKSINLRGF GATGNPRTVQ LIDGMDNSAP
GLNFPVDNIV GVPEQDVESV EILPGAASAL YGPNAIQGLI LINSKSPFLY QGLSANVKTG
IMDASNRTTS TTGFYDASIR YAKAFNNKFA FKMNLSYIKA KDWEATNYTN LNGAGNSDPN
RGAGTAVNYD GVNVYGDENQ QNMRTVGQAL IGAGLLPAAA LNILPNVNIS RTGYPEVNLV
DYNTKSFKFN GALHYRISDK VEAIGQLNYG TGTTVYTATG RYSLRDFSIA QAKLELRGDN
FMVRAYTTQE RSGKSFTAGL ASIGFNEAWK PSATWFGQYV GAYAAARGAG QGDDAAQLSA
RGIADQGRPI PGTEAYKALY DKLSSTPISQ GGGAFSDKSN LYHVEGLYNF KNQIKFADVL
VGANYRQYQL ASEGTLFADQ AAGRNGTIGI TEFGGFIQAS KSLFSEHLKL TASTRYDKNQ
NFEGQFTPRV SAVATFGEHN IRLSYQTGFR IPTTQNQYID LKTPLARLIG GLPEFSDRYN
LANSYSRTDV TALGAAITAS AASPTVQQAA VQLITQQVTA QVTAQVTAQV NAAVAAGQIP
ASAAAAAIQS AVASTLTAVL PGQIAANINN AVTAVAINSN IGNLKPYQRQ AFKPERVASY
EIGYRSVLGK RLFVDAYYYY SVYTNFIGSV ILLQPTAPVA AGLPLASGVL SGGTRNAYSM
PANSSEKINT SGWALGLNYQ LPKGYGISGN LANNKLNNFT PTAELQTSGF NTPEYRWNLG
FTKRPMANSN IGFAVAFKHQ DAFTWEGFAV PTELVPNLYE KTIVPAISNF DAQVNYKVSS
LKSIVKVGAT NLFGKPYFQA YGSSYVGSTY YISLTFDQLM N
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