| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4978 |
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| Symbol | |
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| ID | 8728742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6064862 |
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| End bp | 6066592 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003389755 |
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| Protein GI | 284039825 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000000462292 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAC TACTAAGTAT ACTGGCTATT GCCCTTGGTT TGTCGGCCTG CGACCTGAAC
ATGCTGCCTC AGGACGCTAT TTCGCCCAAT ACGTTTTTCA ATACCGAAAA CGACCTGCTG
CTGTATACAA ACTCTTTCTA TAACGCCCTG CCATCGGCCG AGGATGTGTA TAATGAAGAC
GTCGACAATG TGGTCAAGAA CAGCCTGCGC GATGAGTTGC AGGGTACGCG GGTAGTGCCT
ACCAGCGGGG GCGGCTGGAG CTGGGGCACC CTGCGTAATA TCAATTATTT TCTGGCCAAT
TCGGGGAAGT GCCCGGATGC CAAAGCCGTG GCCAAATACA ATGGACTGGC CCGCTTTTTC
CGTGCCTACT TTTACTTCGG CATGGTGAAA CGCTTTGGTG ACGTTCCCTG GTATTCGAAA
CCCATTGAGG TGATGGACCA GGAAATGCTA ACCAAACCGC GCGACCCCCG CACGATGGTG
ATGGATTCGG TGATGGCCGA TATTAATTAT GCCATTGCCA ATCTCGATGC ATCGCGGCAG
GTAACGACCG TTACCAAATG GACGGCGCTG GCCCTGAAAT CCAGAATCGG TCTGTACGAA
GGCACCTTCC GGAAATACCA TACCGAATTC GGTCTGCCCA ACGCCGATAA ATTTCTGGAC
GAGAGCATTG CGGCCTCGGC TGATTTGATG AAGAACAGCG GGTACACGAT TTACAAAGCC
ACGCCCGCCA CGGCCTACGG TAAGTTATTC TCGTCCGATA ACGCCATTCC CGATGAGGTG
ATTCTTGCCC GTGATTTCAG CGATGAGTTA CAGGTGTACC ATAACCTGAA TTACTACACT
ATGACGGCTT CGTACGGAAA GCCGGGCCTG GAGAAGAAGC TGGTGAATAG CTACCTGATG
GCCGACGGAA CCCGCTTCAC CGACATCAAA GGCTATGAAA CTATGCAGTT TGCGGAGGAG
GTCCAGAACC GTGACCCTCG TTTGTCGCAG ACTATCCGCA CACCCGGCTA CACCCGTATT
GGCGAAACGA CGCCACTAGT ACCGGAGTTT GGTGCTACGG TTACCGGCTA TCAGCTGATC
AAGTTCGTTT CGGCACCCGA GTGGGATACG TTTACCAAAG ACATTACGGA TATGCCCATT
TTCCGGTATG CCGAGGTGCT GCTGAACTAT GCCGAAGCCA AAGCCGAGCG GGGTACGCTG
ACCCAGGCCG ACCTCGATCT GTCGACCAAA CTCACCCGCG ATCGGGTGGG GATGCCGAAC
ATCAATCTGG CCGATGCCAA CGCCAACCCC GACCCGTATC AGGCGCAGCA ATACACGCAG
TTAAAGGGAG CCAACATGGG GGTAATTCTG GAAATACGGC GCGAACGGCG CGTGGAACTG
GTGATGGAAA ATTTCTTCCG CTGGGACGAT ATCATCCGCT GGAAAGAGGG GCAACTGCTC
ACCAAGACAT TTAAGGGTAT GTATTTCCCG GGTCCGGGCA GCTATGATCT GGACAAAAAC
GGCAAAGTCG ATCTGGTTAT CTACGAGGGC ACTAAACCAT CGGTGCCGGG CGCTCAACTC
CTCAAGCTGG GCAGCGAAAT CCTGCTGGAG AATGGTAACA AAGGCGGTAA CATTGTTGTA
AACGGGCATA TCAACAAGAA ATTCAACGAG TCCCGCGATT ACCTATACCC CATTCCAACG
CAGGAGCGGC TGTTGAATAC CAAATTGACC CAGAATCCGA ACTGGGAGTA G
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| Protein sequence | MKKLLSILAI ALGLSACDLN MLPQDAISPN TFFNTENDLL LYTNSFYNAL PSAEDVYNED
VDNVVKNSLR DELQGTRVVP TSGGGWSWGT LRNINYFLAN SGKCPDAKAV AKYNGLARFF
RAYFYFGMVK RFGDVPWYSK PIEVMDQEML TKPRDPRTMV MDSVMADINY AIANLDASRQ
VTTVTKWTAL ALKSRIGLYE GTFRKYHTEF GLPNADKFLD ESIAASADLM KNSGYTIYKA
TPATAYGKLF SSDNAIPDEV ILARDFSDEL QVYHNLNYYT MTASYGKPGL EKKLVNSYLM
ADGTRFTDIK GYETMQFAEE VQNRDPRLSQ TIRTPGYTRI GETTPLVPEF GATVTGYQLI
KFVSAPEWDT FTKDITDMPI FRYAEVLLNY AEAKAERGTL TQADLDLSTK LTRDRVGMPN
INLADANANP DPYQAQQYTQ LKGANMGVIL EIRRERRVEL VMENFFRWDD IIRWKEGQLL
TKTFKGMYFP GPGSYDLDKN GKVDLVIYEG TKPSVPGAQL LKLGSEILLE NGNKGGNIVV
NGHINKKFNE SRDYLYPIPT QERLLNTKLT QNPNWE
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