| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4972 |
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| Symbol | |
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| ID | 8728736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6057670 |
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| End bp | 6058503 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | Phytanoyl-CoA dioxygenase |
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| Protein accession | YP_003389749 |
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| Protein GI | 284039819 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.170605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000000026195 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAGCGA CTATTGACAA AGCAGTATTA CTGACCGAGC TGGATGCTCC TTATCCGGTC
AGTCAGGAGG CTATTGCGTT CTATCGGGAG AAAGGGTATG TAAAGTTGAA AGATGTACTG
AGCCCGGCAG TACTCGAGTA TTATGGTACG ATCATATCCG ATCTGGTTTT TAAACTCAAC
ACGCTCATCA AACCAATGGA AGAGCGCACG ACCTACGAGC GGGCGTTCCT CCAGATTATG
AATCTGTGGC GCGAAGATGA GCAGGCCAAA GAATTCGTTT TTTCGAAACG ACTCGCACAA
ATCGCTACCG ATCTGATGGG CGTTCAGGGA GTCCGAATCT ATCACGATCA GGCGCTGTAT
AAAGAGCCGT CGGGTGGCAT TACGCCCTGG CATGCCGATC AGTTTTACTG GCCGCTGGCG
TCGCCCAATA CCGTTACCGT CTGGATTCCA TTGCAGGCCA CGCCCATGGA AATGGGACCG
CTGGCTTTTG CCGAAGGTAG CCAGACTGTT GAAATTGGCC GCGATGTAGA GATTAGCGAT
GAAAGCGAGA AAATTCTGGC GGATGAACTC ACCCGGCAGA ACTTCACCAT GCACGACACC
CCGTTCGATC TCGGCGAGGT GAGTTACCAC GCGGGCTGGA CATTCCACCG CGCCGGTCCG
AACGTCTCTG ACCAGCCGCG CAAAGTGATG ACCATGATTT ATATGGATAA AGATCAGGTC
GTTATGCAGC CACGCAACCG GTTTCAGGTG GCCGACCACG CCAAATGGCT TGATAATGTG
CCCATTGGCA GCCATCCACA GGATGAACTA AACCCGGTGA TATTTAGCTA TTAA
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| Protein sequence | MEATIDKAVL LTELDAPYPV SQEAIAFYRE KGYVKLKDVL SPAVLEYYGT IISDLVFKLN
TLIKPMEERT TYERAFLQIM NLWREDEQAK EFVFSKRLAQ IATDLMGVQG VRIYHDQALY
KEPSGGITPW HADQFYWPLA SPNTVTVWIP LQATPMEMGP LAFAEGSQTV EIGRDVEISD
ESEKILADEL TRQNFTMHDT PFDLGEVSYH AGWTFHRAGP NVSDQPRKVM TMIYMDKDQV
VMQPRNRFQV ADHAKWLDNV PIGSHPQDEL NPVIFSY
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