Gene Slin_4953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4953 
Symbol 
ID8728717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6037522 
End bp6037929 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content49% 
IMG OID 
Productresponse regulator receiver protein 
Protein accessionYP_003389730 
Protein GI284039800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0356206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAAG CAACAAACCC ACTAATCTAT GTAGTTGACG ACGATCCTTA CCATCTGGAA 
CTAGTTAACT ACATTTTTAG GAGGTATCAT GCTCATTGTA AATTGCGCTG TTTCAACGAT
GGGACGGACA TGCTCTTTCA TCTGACTCAT CAGTTGGACC GACAGCTGCC CAACTTAATC
CTGCTGGACT GGAACATGCC GGTTATGGCG GGCAACCATG TGCTGGAGCT TTTACGCATG
GATTCACAAT GGCAATCGAT TCCGGTCGTT GTGCTCAGCA ATTCGGAAGT CGATAAGGAT
CGTGCCCGGA GCTATCACTT AGGTGGGCGG GCTTTCATTG CCAAAGCTGA AACGCTCCAG
GAGCTTATCG ATACAATCGC CCTGATTCTG GAGCTGTGGT TAGCCTAG
 
Protein sequence
MRQATNPLIY VVDDDPYHLE LVNYIFRRYH AHCKLRCFND GTDMLFHLTH QLDRQLPNLI 
LLDWNMPVMA GNHVLELLRM DSQWQSIPVV VLSNSEVDKD RARSYHLGGR AFIAKAETLQ
ELIDTIALIL ELWLA