| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4772 |
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| Symbol | |
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| ID | 8728536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5809038 |
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| End bp | 5810924 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | protein of unknown function DUF1080 |
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| Protein accession | YP_003389549 |
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| Protein GI | 284039619 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.205682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAACCC CACCTCTTAC AGCCCGTTTT AGCTGGCTGC TGAGCGCTGG CTGGGCCCTC
AGTCTCGGTT TGGCAATGGC CCAACCCGCT CCGGCTCCCG GCATCCCGCT TCCACTCAAC
GATTTGAGTG CGTTCACTTC CCCAACGCCC AACTGGCGTA TTGTTGGCAC CGTTCGCGCC
GACCTCAATA AAACCAATAC GCTGACGACT GATAAAGGCA CCGGTATTCT GGCCAATATT
CCACTGGCAA AGATGCCCGA TGATCCTAAG GTTCCGTACA AGTACGATCT GCTCACGACC
TTACAACATG GCGATGTAGA CCTGGAATTC GATTACATGA TGGCGTCGCA GTCCAACTCA
GGCGTTTATC TACAGGGACG TTACGAAATT CAGCTGCGCG ATAGCTGGGA TATCCGTACC
CCCAACGTAC ACGACAACGG TGGCGTTTAT GAACGCTGGG ACGACAAACG CCCCGAAGGA
CAAAAAGGCT ACGAAGGGCA CGCAGCCCGG CAGAATGCCA GCCGTGCCCC CGGTTTATGG
CAGCACATGA AAATATCGTT CCAGGCCCCC CGCTTCAATG CGGCCGGGCA GAAGACCGAA
AACGGCCGTG TTATCCGGAT TGAACTGAAC GGCGTTCCTA TTCAGGACGA TGTTGAACTG
ACGGGACCAA CGCGTGGTTC GCTGTTTGCC GACGAAAAGC CGCTTGGCCC GCTCCGCATT
CAGGGCGATC ATGGCGCAGT GGCTTTCCGG AACATCCGCT ATGTATCGTA TGACAAACCC
CGGCCCGAAC TGCTCAATCT GAAATACGCC GTCTACAAAG GCAAGTACGA AAAAGAGCCC
GATTACGACA AAACAGCGCC CGAATCGGAA GGCGCAACGA AAGTGCTGTC GGCATCGGTC
AACCGGATTC CCAATGAGTT TCTGATTCGG TACACGGGTA CGCTACGCGT GTCGGAACCC
GGCGAATACC ACTTTAACCT GGGCGCTCCG GGGGGCGGGG GTATGCTGAA GATCAACAAC
CAGGTAGTGG TTGCGCCTGG CGGCTGGAAT GGCTCGGGTA AAGCCACACT GCCCAAAGGC
GATCTTCCCT TTGAGCTGTT CTACTCCAAA TTTGTCGACT GGGCACAACC TGCCCTCGGC
CTTACCGTAG CCGGACCCGG TGTTCGGGAG TTTGTAATCA GCGAAGGCGC GGGTAGTAAC
GGCGAGGAGG TCGACCCGAT TATTGTCGAT GCCCCCAGCA ACACCGTTCT CCGGAGCTTT
ATGGACATGC CCGGTGAAAA GAACACCCAG GGACGTACCC TCCGCGTAGT TCATGCCATT
TCGGTAGGTA GCCCCGAGCA TGTGCATTAT ACGTACGATC TGGATAAAGG CGCACTGGTG
CAGGTTTGGC GGGGCATGTT CCTGGATGCT ACACCCATGT GGCACGACCG GGGCGATGGC
TCTTCCCGCC CGATGGGTAT GGTGCAGCGG CTGGGTGCTC CCGTGCTTTT CCTGAGCAAA
CTGGCTTCAC CACAAGCCGC CTGGACGGCC GACACCACCG GTTCGGGCTA CCGGCCCAAA
GGCTATGTAC TGGACGAAAG CGACCGACCC ACCTTCCGTT ATCAGAGCTA CGGCTCGTCC
GTCGATGACA AAATTCGGGT GCTGGCCGAT GGGAAAGGCG TTCAGCGGGA AGTGACCATC
GCCAATCCGG CAGGCGATCT GTACGCCCGG TTGATTAGCG GTGCCAGCAT TACGCCGATG
GACAACAACA TGTATCTCGT TGACGGGCAG GAGTACCTGC GCATCGACGA TGTAGCGGGC
GCGAAGCCAA CCATACGGGA CGCCAACGGC CGACAGGAGT TGATTGTACC GGTCAAAGGA
AAAGTCATTT ACTCAATACT GTTTTAA
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| Protein sequence | MVTPPLTARF SWLLSAGWAL SLGLAMAQPA PAPGIPLPLN DLSAFTSPTP NWRIVGTVRA
DLNKTNTLTT DKGTGILANI PLAKMPDDPK VPYKYDLLTT LQHGDVDLEF DYMMASQSNS
GVYLQGRYEI QLRDSWDIRT PNVHDNGGVY ERWDDKRPEG QKGYEGHAAR QNASRAPGLW
QHMKISFQAP RFNAAGQKTE NGRVIRIELN GVPIQDDVEL TGPTRGSLFA DEKPLGPLRI
QGDHGAVAFR NIRYVSYDKP RPELLNLKYA VYKGKYEKEP DYDKTAPESE GATKVLSASV
NRIPNEFLIR YTGTLRVSEP GEYHFNLGAP GGGGMLKINN QVVVAPGGWN GSGKATLPKG
DLPFELFYSK FVDWAQPALG LTVAGPGVRE FVISEGAGSN GEEVDPIIVD APSNTVLRSF
MDMPGEKNTQ GRTLRVVHAI SVGSPEHVHY TYDLDKGALV QVWRGMFLDA TPMWHDRGDG
SSRPMGMVQR LGAPVLFLSK LASPQAAWTA DTTGSGYRPK GYVLDESDRP TFRYQSYGSS
VDDKIRVLAD GKGVQREVTI ANPAGDLYAR LISGASITPM DNNMYLVDGQ EYLRIDDVAG
AKPTIRDANG RQELIVPVKG KVIYSILF
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