Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4636 |
Symbol | |
ID | 8728400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5642058 |
End bp | 5643548 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | beta-lactamase |
Protein accession | YP_003389413 |
Protein GI | 284039483 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTATGA ATCCATCTAG GCTGACTACC TGCTTGTTAG GATTAGTAAT CACGTTTACG TTCAGCTTCG GACAAAATCG TCCCGCTCGG GCTACTTCCT CTATGTCCAC GCAAAAATCG GCGAACGCGC TCGACAAGTT TTTGCGTGAT CAGATGGGCC AGCTTAGAAT TCCGGGCATG CAGGTGGCCG TTGTACAGCG TGGGCATCTG GTGTTCAGCA AATCGTACGG CTTTGCCAAT CTACAGGACT CAATTCCAGT AACAAGCAAA AGCGTTTTCG CTATCAACTC CTGCACGAAA GCGTTTACGG GCGTGGCCAT TATGCAGCTG GTTGAAGAAG GTAAAGTGGA CCTCGGCGCT CCCGTTTCCC GCTACCTCGA CGGACTTCCG GCAACCTGGC AACCCATAAC GATTCGACAG TTGTTGACCC ACGTTTCGGG CCTGCCGGAT ATTCTTCGGG TTCTCGGTAC ACCTGGACAG GAGATCAGCG AGGAAACCGC CTGGGCTCGG ACAAAGGCCA TGCCGATGGA TTTTCCAAGG GGTGAGCAGT TTAGCTATAA CCAGACAAAC TACGCGCTAC TGGGCAAAAT CATCGACAAG CTCAGGGATA AACCGTTCGT TCAGGTATTC AACGAACGAC AGTTCATGAT AGCCGGTCTG GCCAATACCG GCTTTGGTGA CTCCCGCGAT GTAATACCGC ATAAAGGCCC ATCCTATCGG TATATCTCCC GTCTGGATGG GAATGTGCTG CATATCCCTA AGCTTACCCC CTCCTACGAG GAATTCCCCG CCTTCCGTCG GACAGCTTCG GGTATGAACA GCACCGCCGA GGATATGGCT CACTGGATTA TCGCCTTGCA GCAGGGTAAA CTGTTAAAAA CGAAAGCGGC CCGTGATACG ATGTGGACAG CGGGTCGATA CAACAACGGT TCGCCTACGC AGTGGGCGCT GGGCTGGGGC CTGACCAAAT TCCGACCCAA ACACTGGGCC GTGGGTATGT CGGGGGGTGG TCGTTCGGCT TTTCTGGTCT ATCCCGACGA TGATCTGGCG GTTATTGTAT TGACGAATCT GGCGGGTTCT TCACCGGAAA ATTTCATTGA GGAAATCGCC GGGTATTATA ATCCAGACAT TCCGGCATCC GACCCGATTA CGAGCCTTCG GCTACAGCTA CAGAAACGCG GTTTCGAGCA GGCTATCCCG GTAGCGAACG AATTGAAAAA GCGAAACCTA CAGCCGAACG AAGATGAATT GAACGACTGG GCCTACCGCC TGATGAGCAG CGGCCAGACG AAAGAGGCCC TTGAGCTTTT CAAACTGAAC GTCGACCTCT ACCCCCAAAG CTGGAACGTC TACGACAGTC TGGCCGAAAG CTACGAGCGG CTGGGTAATT CGGAGCTGGC GGTCAAACAT TATAATCGCT CGCTGGCCTT GAACCCCGAC AACAAAAACG CGACCGAACG CTTAAAACGG CTAGCCCAAA CCAATAAGTA A
|
Protein sequence | MAMNPSRLTT CLLGLVITFT FSFGQNRPAR ATSSMSTQKS ANALDKFLRD QMGQLRIPGM QVAVVQRGHL VFSKSYGFAN LQDSIPVTSK SVFAINSCTK AFTGVAIMQL VEEGKVDLGA PVSRYLDGLP ATWQPITIRQ LLTHVSGLPD ILRVLGTPGQ EISEETAWAR TKAMPMDFPR GEQFSYNQTN YALLGKIIDK LRDKPFVQVF NERQFMIAGL ANTGFGDSRD VIPHKGPSYR YISRLDGNVL HIPKLTPSYE EFPAFRRTAS GMNSTAEDMA HWIIALQQGK LLKTKAARDT MWTAGRYNNG SPTQWALGWG LTKFRPKHWA VGMSGGGRSA FLVYPDDDLA VIVLTNLAGS SPENFIEEIA GYYNPDIPAS DPITSLRLQL QKRGFEQAIP VANELKKRNL QPNEDELNDW AYRLMSSGQT KEALELFKLN VDLYPQSWNV YDSLAESYER LGNSELAVKH YNRSLALNPD NKNATERLKR LAQTNK
|
| |