Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4554 |
Symbol | |
ID | 8728318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5520859 |
End bp | 5522136 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | histidine kinase |
Protein accession | YP_003389333 |
Protein GI | 284039403 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00930403 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGC TCAGCCAGAC AGCCCGCTAT TTACTCAGCA CGGCTTTTGC GATTGCGCTG GTGGGATCTG TAGGCTTTTA CACGCTTATC CACCGAACAA TCCGGTATGA AGTCGATGAA ATTCTAACGG CCCAGGTAAA CCAGACAGCC CAAAAGCTAC GCCATCAGCC GCTTTCGACC CTAACCGACT GGGATAACAA CCCGCGCATC GACCGGGTGA ATACACCCAT AAGGCCCACC TTCACCGACA TAACCGTACC CGACTCGCTG AATAATAATG AACCGATTCC AATTCGGCAG CTCCAGCAAA CGGTGCTCAT ACAGGGGCAG TTGTATCTGG TCACCATTCA GCAGCCGTAC TACGAATTCA ATGAGCTGTC GCGCGAAATA TCGGCGGGGG TTATCATTGG CTTTTTACTA CTGATGGGCT TGTCCGTCGC TATCGGTGTT GGTTTATCGA GTCGTTTGTG GTATCCGTTT TACGCCACCA TCAACCAGCT TAGCACCGTC CGGCTCGATA CAGGCAGCGA ACCGGTATTC CCGGAAAGCA ATATCCGGGA GTTTAGTCTC CTTAGCCGGT CGCTGAGGGA ACTGACGCAG AAATTACGAC GCCAGTTTTC CCTCCAGAAG CAATTCGCCG AGAACGCGTC GCACGAATTA CAAACCCCGT TGGCGGTTGC ATCGGCTGAA CTTGATTTCC TGCTTCAGTC CGACCACCTG ACGGAAAATG ATTACGCCCA CCTGCAACGG GCCACCGACG CGCTGGGGCG GTTGAGCCAG CTCAATCGTT CATTGTTGTT ACTCACACAG GTAGAAAACA ACCAGTTTGC CAACGACGAA TCTGTTGACA TGAGCGAGTT GCTGACACAA TGTGCGGATG AATACGAGCC TTTTTTTCAA CACCGACACT TGGTGGTTAA ACGAGCGATT GCCCCCCAAG TCATTCTGCG TATGAACCGG CAACTAGCGC GCGTCCTACT CTCAAATCTC CTGAAGAACG CGGTTCGGCA TAGCGGTGGC GGAGTTGCAA GAAAAGAAAG CACTGTCCGT TTAGAATTAA CGACCAACGC GCTAACCATC ACAAATACAG GCGAGCCATT ACCCTTTCCC GAGCACCAGT TGTTCTATCG GTTCGTCAAA AACCCGGCCC GGCCCGACTC GATGGGATTG GGGCTGGCAC TTGTCAAGCA AATCTGTGAG CGCTATGCCC TGCCAATAAC TTACGTGTAT AACGGAGAAA CCTGGGAGCA CTCATTTCGG ATAGAATTCC CGACCTGA
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Protein sequence | MSLLSQTARY LLSTAFAIAL VGSVGFYTLI HRTIRYEVDE ILTAQVNQTA QKLRHQPLST LTDWDNNPRI DRVNTPIRPT FTDITVPDSL NNNEPIPIRQ LQQTVLIQGQ LYLVTIQQPY YEFNELSREI SAGVIIGFLL LMGLSVAIGV GLSSRLWYPF YATINQLSTV RLDTGSEPVF PESNIREFSL LSRSLRELTQ KLRRQFSLQK QFAENASHEL QTPLAVASAE LDFLLQSDHL TENDYAHLQR ATDALGRLSQ LNRSLLLLTQ VENNQFANDE SVDMSELLTQ CADEYEPFFQ HRHLVVKRAI APQVILRMNR QLARVLLSNL LKNAVRHSGG GVARKESTVR LELTTNALTI TNTGEPLPFP EHQLFYRFVK NPARPDSMGL GLALVKQICE RYALPITYVY NGETWEHSFR IEFPT
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